Pairwise Alignments

Query, 263 a.a., exodeoxyribonuclease III from Magnetospirillum magneticum AMB-1

Subject, 270 a.a., exodeoxyribonuclease III (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  122 bits (307), Expect = 6e-33
 Identities = 91/273 (33%), Positives = 135/273 (49%), Gaps = 18/273 (6%)

Query: 1   MRLVTWNINSIRLRIDLLRQVASVMNPDIICLQEIKVDDPLFPLDACREMGFGHVAFHGM 60
           M++V++NIN +R R+  L+ +     PDII LQE KV D  FPL     MG+ HV +HG 
Sbjct: 1   MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGY-HVHYHGG 59

Query: 61  KGYNGVAILSRL-PIAEARPLSRCGRDDRRHLMA---RLENGVEVHCL--YIPAGGDIPD 114
           K + GVA+LS++ P+   +  +    D +R ++       NG  +  L  Y P G  I  
Sbjct: 60  KAHYGVAMLSKVAPLKVQKGFATDEEDAQRRMIIGTFAQANGRPLTVLNGYFPQGESIDH 119

Query: 115 PETNDKFAHKLDFVREITAWAAAEFTPDSRAILAGDFNIAPLEADVW----SHKQLLKV- 169
           P    K+  K  F +++ A   A  + D    + GD NI+P++ D+     + K+ LK  
Sbjct: 120 P---TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTG 176

Query: 170 -VSHTPVEVELLNAFQASVPFVDAMRHFVPPEEKLFTWWSYRSPDWQKNDRGRRLDHVWV 228
             S  P E E L   Q     VD  R   P   + ++W+ YRS  +  N RG R+D +  
Sbjct: 177 KCSFQPEEREWLKTLQ-DWGLVDTFRQLHPDRSERYSWFDYRSKGFDDN-RGLRIDVILA 234

Query: 229 TPALVPSLRGMLVAREARSWEQPSDHVPVMVDF 261
           TP+L   L    V  E R  ++PSDH P+   F
Sbjct: 235 TPSLAARLVESDVDYELRGIDKPSDHAPIWSTF 267