Pairwise Alignments

Query, 166 a.a., sigma-70 family RNA polymerase sigma factor from Pantoea sp. MT58

Subject, 196 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 66.6 bits (161), Expect = 2e-16
 Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 8   HLTRLWRYGYVLSHNRDMAEELVQSTCVRALERSAQFMPGTRIDRWLFSILHSIWVSDLR 67
           H+  ++ + + L+ + D A++LVQ T ++A      F  GT    WLF IL + ++++ R
Sbjct: 25  HIDSMYNFAFRLTFDEDDAKDLVQDTYLKAYRFINSFEQGTNAKAWLFRILKNSFINEYR 84

Query: 68  ARK-------VRQGQGFVDPDAL---LAADNHATSDDNRHFQRIMQHVNALPEAQRNALF 117
            +         ++ + + + D++   + +D    +  +     I   +N+L    R  + 
Sbjct: 85  KKSKQPSKVDYQEVETYYNSDSVDYNITSDLRVDAVKDMLGDEISNALNSLAVDFRTVII 144

Query: 118 LVYVEGLTYQEAAETLAVPVGTIMSRLAAARATL 151
           L  +EG TY+E A+ L +P+GT+ SRL  AR  L
Sbjct: 145 LCDLEGFTYEEMAKILDIPIGTVRSRLHRARNLL 178