Pairwise Alignments

Query, 256 a.a., helix-turn-helix domain-containing protein from Pantoea sp. MT58

Subject, 278 a.a., helix-turn-helix domain-containing protein from Serratia liquefaciens MT49

 Score =  122 bits (306), Expect = 8e-33
 Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 18/259 (6%)

Query: 4   KSELSHFLRSRRARTRPDSRDLRTRERRRTPGLRREEVAARIGISTEWYTKIEQGRVDTL 63
           + +L+ FLR +R +  P +  L +  RRRTPGLRREEVAA  G+   WYT +EQGR   +
Sbjct: 10  RQDLADFLRQKREKLSPQAVGLPSGTRRRTPGLRREEVAALAGVGLTWYTWLEQGREINV 69

Query: 64  SDRIVSALGRALELDKVEVLHLQSLTRRKTETENDGVIPEG-----VIKLIRSLAE---- 114
           S   +  L R L+LD     HL  L  ++        +P G     V  L+R L +    
Sbjct: 70  SVDFLENLARVLKLDATGRYHLFLLAHQRPP------VPVGHQWCQVSPLVRRLLDDLQL 123

Query: 115 -PAYVTNAHWDVLIWNSAAAELITDFGQLSVKDRNILIFMLTTAEARALFGDTWHKEAQR 173
            PAYV N  WD++ WN AA  L    G      RN+L  +    +      + W  +A +
Sbjct: 124 RPAYVMNLSWDIIAWNPAAERLFA-IGDRPADQRNMLWMLFADPQLNQRLVE-WQVQAPQ 181

Query: 174 MLGLFHADYDRNAHNPAFPSLISRLERECQEFSEWWNEHVIAAPVSGTKCLTGKDGVKRN 233
           +L  F  DY R   +      +  LE+   +F + W +H I     G +        +  
Sbjct: 182 ILASFRRDYARAPQDATMQQRVQALEQVSPQFRQLWQQHDIHGRCQGERTFIVPGAGQVT 241

Query: 234 FSYSSFMSNDAPSLKMSIY 252
           F ++SF+ ++   L++ +Y
Sbjct: 242 FEHASFIVDEENHLRLVMY 260