Pairwise Alignments

Query, 309 a.a., RepB family plasmid replication initiator protein from Pantoea sp. MT58

Subject, 325 a.a., RepFIB replication protein A from Escherichia coli ECOR27

 Score =  360 bits (923), Expect = e-104
 Identities = 180/277 (64%), Positives = 220/277 (79%), Gaps = 4/277 (1%)

Query: 18  VTKNSGEVIQLHPNKNNTVQPVALMRLGLFVPTLKSTARGKSGAMASTDATKELKNLTLV 77
           V K+SGE++ L PN NNTVQPVALMRLG+FVPTLKS    K   ++ TDAT+EL  L+L 
Sbjct: 1   VDKSSGELVTLTPNNNNTVQPVALMRLGVFVPTLKSLKNSKKNTLSRTDATEELTRLSLA 60

Query: 78  KAEGYEKITITGARLDMDNDFKTWAGIIQSFSRYPTKGDTVTLPFIDFVKMCGIPSANSS 137
           +AEG++K+ ITG RLDMDNDFKTW GII SF+R+   GD V LPF++F K+CGIPS+ SS
Sbjct: 61  RAEGFDKVEITGPRLDMDNDFKTWVGIIHSFARHNVIGDKVELPFVEFAKLCGIPSSQSS 120

Query: 138 AALRKRLDASLRRIATNTLSF----EGNGKAYHTHLVQSAYYDREKDIVRIQADPKLFEL 193
             LR+R+  SL+RIA   +SF    E + + Y THLVQSAYYD E+DIV++QADP+LFEL
Sbjct: 121 RRLRERISPSLKRIAGTVISFSRTDEKHTREYITHLVQSAYYDTERDIVQLQADPRLFEL 180

Query: 194 YNFDHKVLLQLRAISRLKRKESAQALYTFLESLPTNPAPISLARLRMRLNLGSKTTTQNH 253
           Y FD KVLLQL+AI+ LKR+ESAQALYTF+ESLP +PAPISLARLR RLNL S   +QN 
Sbjct: 181 YQFDRKVLLQLKAINALKRRESAQALYTFIESLPRDPAPISLARLRARLNLKSPVFSQNQ 240

Query: 254 VVRRAMEQLKEIGYLDYSEVKRGRSVFFIIHSRTPKL 290
            VRRAMEQL+EIGYLDY+E++RGR+ FF IH R P+L
Sbjct: 241 TVRRAMEQLREIGYLDYTEIQRGRTKFFCIHYRRPRL 277