Pairwise Alignments

Query, 361 a.a., type VI secretion system baseplate subunit TssG from Pantoea sp. MT58

Subject, 347 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 75/309 (24%), Positives = 125/309 (40%), Gaps = 27/309 (8%)

Query: 24  NFYRLCQLLEKRNPGGPLMGSTSHPADDPVRFAPHPGMGFPVSELKAVDYDEADDSRPPL 83
           +F++  + +E  +P  P +G +   ADDP+R        F  + L +VD     D +P  
Sbjct: 26  DFFQALRRIECESPDLPRLGHSLRLADDPLRLGQQADCTFAPATLASVD--PGGDGKPAR 83

Query: 84  IRTTFMGMYGVDSPLP---TTYLDDITQRREGHEALQGFLDIFSHRILTQFYRIWRKYSY 140
           +   F G+ G + PLP   T Y+ +  QR       + FLD+F HR+L+ FYR W +   
Sbjct: 84  LEQFFFGLGGPNGPLPLHITEYVRE-RQRNNADSTSKQFLDVFHHRLLSLFYRAWAEARP 142

Query: 141 PATFEPGGTDTISQSLLGLVGLGIPGTANHIATPVSRFLALLGVLQQPGKTQEGMQGLVT 200
             + +    D  S  L  L G G+P   N    P +  L   G L    +  +G++ +  
Sbjct: 143 TVSHDRPDDDYWSARLAALSGRGMPSLLNQGLIPDTAKLHYSGHLSAQTRYPDGLKAI-- 200

Query: 201 LLAPDTTVQVSPYCLRPVEVSQPLGFYGD---------NDFLLDGNTPLGEEAMDANSQL 251
                    +  Y   PVE+ + +G + +         +   L  +  LG    D   + 
Sbjct: 201 ---------LGEYFGLPVEIEEYVGQWLELPERSRVSVSANRLGVDFCLGSFVWDRQHKF 251

Query: 252 LIALSTDNEQESQNWKPDGLLYQDFLVMLRVYLGWRFKAKITLTTRTHLLAAPPLGDGPF 311
            I L     ++     P    + + +  +  YLG      + L  +   + A  L +G F
Sbjct: 252 RIRLGPLTLEDYMGMLPGQQPFNELVAWVAEYLGHELDWDLNLVLQQPEVPALQL-NGQF 310

Query: 312 WLGMNGVLG 320
            LG N  LG
Sbjct: 311 RLGFNTWLG 319



 Score = 23.9 bits (50), Expect = 0.007
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 229 DNDFLLDGNTPLGEEAMDANSQLLIALSTDNEQESQN 265
           +  F L  NT LG  A DAN  +L     D    S+N
Sbjct: 307 NGQFRLGFNTWLGSPAHDANDLILARHYADQATTSRN 343