Pairwise Alignments

Query, 477 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Pantoea sp. MT58

Subject, 481 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  150 bits (378), Expect = 1e-40
 Identities = 123/432 (28%), Positives = 201/432 (46%), Gaps = 29/432 (6%)

Query: 32  DGANLALMVQKVGASTPIIDYHGKQMALPASTMKVVTALAALLELGGDFRFQTTFETRGA 91
           +GA ++LMV+   + + +  ++ +   +PAS +K++T  AA+  LG  +RF T   + G 
Sbjct: 41  NGATVSLMVRDARSGSTLYQHNSRTRLIPASNLKLLTTAAAMDVLGPQYRFSTQLLSNGT 100

Query: 92  IIDGTLNGDLVARFGGDPTLTRQDLRNMVAAIKKQGINHIKGNLVIDTSVFASHDMAPGW 151
           +    L G+L  +  GDPT    D + + A +  QG+  ++G+LV D + F +  +   W
Sbjct: 101 LQGERLTGNLYLKGLGDPTTQFADYQALAAQLAAQGVRQVQGDLVFDDTFFDAERLGVDW 160

Query: 152 PWNDMTQCFSAPPGAAIVDKNCFSVSLYSANTPGENAFVRIASYYPAHMYSQVRTIGRNS 211
             +D +  + A   A  V          S NT  +   + + +  P+ +   V  +   S
Sbjct: 161 AHDDESTYYGAQISALTV----------SPNTDFDAGTLLVTAKAPSGVGQPVSVVVSPS 210

Query: 212 GEGQYCELDVVPGELNRYTL-----TGCMRQRAEPLPLAFAVQDGAAWAGEILKAELRSS 266
            +        V G  N Y +     T  ++      P   + Q  + W    L A L   
Sbjct: 211 TDYVQLSNRAVSGPGNNYGITRQHGTNLLQLTGTLAPGKQSRQWVSVWEPTQLVANLFEQ 270

Query: 267 EIDYSGHLVRQTQV---TEPGT--VLASTQSAPLHTLLHTMLKKSDNMIADTVFRTIGHH 321
            +   G  V   +V     P T  VLA  QSAPL  LL  +LK S+N +++   + +G  
Sbjct: 271 ALAQQGIQVLGRRVIGGASPVTARVLAEHQSAPLQALLTPLLKLSNNNMSEAFLKAMGRK 330

Query: 322 YFNVPGTFRAGQDAVRRILKAKANVDMGNSIQVDGSGLSRHDLISPQTMMQVLQFIAKND 381
             N  GT +AG  AV   ++ +  +D     QVDGSGLSR +L+S Q +  +L   AK  
Sbjct: 331 ASNA-GTAQAGVAAVADFMR-RQGLDPMTLSQVDGSGLSRRNLVSSQNLTDLLLATAKQP 388

Query: 382 NTLDYISMLPLAG-----YDGTLQYRGGLHEAGLDGKVSAKTGSLQGVYNLAGFITTSSG 436
               + + LP+AG       G+L+YR  L     +  + AKTGS+ GV +L+G+IT + G
Sbjct: 389 WFEAWYNALPIAGNTDRISGGSLRYR--LRGTPAENNLHAKTGSMAGVSSLSGYITDAQG 446

Query: 437 ARVAFVQFLSGY 448
            R+ F    + Y
Sbjct: 447 RRLVFSMISNNY 458