Pairwise Alignments

Query, 294 a.a., MDR efflux pump AcrAB transcriptional activator RobA from Pantoea sp. MT58

Subject, 289 a.a., helix-turn-helix domain-containing protein from Pantoea sp. MT58

 Score =  135 bits (340), Expect = 1e-36
 Identities = 87/257 (33%), Positives = 126/257 (49%), Gaps = 1/257 (0%)

Query: 7   IRDLLVWLESHLDQPLSLDNVAQKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKAAVAL 66
           I DL+ W+E+HL   +++D +  K+GYSKWH+QRMFK++TG  + AY R RRL+ AA+AL
Sbjct: 11  INDLVEWIEAHLTDDINIDQITLKSGYSKWHMQRMFKEMTGQTLAAYTRKRRLTMAAMAL 70

Query: 67  RLTSRPILDIALQYRFDSQQTFTRAFKKQFAQTPAWYRRSSEWNSFGIRPPIRLDDETQP 126
           RLT   ++DIA+++ FD+QQ FTR FK  FA TP  +RR            I +    + 
Sbjct: 71  RLTRMTLIDIAVRFGFDNQQNFTRVFKGHFALTPGAFRRIPHLPVKNFHGRILVRSLAER 130

Query: 127 EPAFVSLPETVLVGQTQNYTCILEQISSYRDEMRMHFWKQFLLETDTIPPVLYGLHQVRA 186
                   E  L G+TQ + C      + RD       +Q +    +     +   Q   
Sbjct: 131 ATLVEREEELHLRGETQEWECKFGDYFADRDHQVADQARQLVALAGSHVAQGWLGFQYGP 190

Query: 187 SQDKDDEQEILYTTAVPADSAVNLHSGQKVILE-GGDYVQFTFNGPRVNLQEFILLLYGT 245
            Q   D+Q I    A+    A  L        E  G Y    ++G    L  FI  +Y  
Sbjct: 191 GQSSADQQNISLFQALEPQYADLLSDHTSSWSEAAGLYASIRWSGRPEQLTRFIEDIYYQ 250

Query: 246 CMPTLGLTRREGQDIER 262
            +P LG+ RR G+D+ R
Sbjct: 251 HLPALGVARRPGKDLLR 267