Pairwise Alignments

Query, 294 a.a., MDR efflux pump AcrAB transcriptional activator RobA from Pantoea sp. MT58

Subject, 297 a.a., helix-turn-helix domain-containing protein from Serratia liquefaciens MT49

 Score =  136 bits (343), Expect = 5e-37
 Identities = 87/257 (33%), Positives = 134/257 (52%), Gaps = 19/257 (7%)

Query: 7   IRDLLVWLESHLDQPLSLDNVAQKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKAAVAL 66
           I +L+ W+E HL++  +LD VA+ +GYSKWHLQR FK +TG  +  YIR+R L++AAVAL
Sbjct: 9   IEELIEWVEIHLEKRPNLDEVARISGYSKWHLQRKFKRITGIQLATYIRSRILTRAAVAL 68

Query: 67  RLTSRPILDIALQYRFDSQQTFTRAFKKQFAQTPAWYRRSSEWNSFGIRPPIRLD----D 122
           R+T R I+DI+ +  FDSQQTFTR FK++F  TP  YR    W+   + P    D     
Sbjct: 69  RITHRSIIDISDELGFDSQQTFTRMFKQRFDTTPNRYRSMDTWDVKNLMPRFSFDANFAA 128

Query: 123 ETQPEPAFVSLPETVLVGQTQNYTCILE------QISSYRDEMRMHFWKQFLLETDTIPP 176
           +  PE   ++LP+  LVG ++      E         + +DE+   F++   ++   +  
Sbjct: 129 DYYPEVKRLTLPDMQLVGFSRQLDFASEAEIEHSSCMAMKDEIFTDFFRGLSVDCHRV-- 186

Query: 177 VLYGLHQVRASQDKDDEQEILYTTAVPADSAVNLHSGQK---VILEGGDYVQFTFNGPRV 233
             Y +H VR     DD     +  AV  ++  ++ SG +   + + G +Y+     G   
Sbjct: 187 --YSIHSVR--NRDDDAYSATHIMAVDPENKQDILSGYQIDTIPIAGREYISINHLGSAK 242

Query: 234 NLQEFILLLYGTCMPTL 250
              +F   L    MP L
Sbjct: 243 ECSQFFAYLITHVMPGL 259