Pairwise Alignments

Query, 553 a.a., HTH-type transcriptional regulator SgrR from Pantoea sp. MT58

Subject, 552 a.a., SgrR, sugar-phosphate stress, transcriptional activator of SgrS small RNA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  778 bits (2010), Expect = 0.0
 Identities = 376/552 (68%), Positives = 437/552 (79%), Gaps = 3/552 (0%)

Query: 1   MSSSRLKQQFIRLWQSCQGQTQEITLSELADLLHCSRRHMRNLLNRMQAAGWLTWQAEAG 60
           M S RL+QQFIRLWQ C G+TQ+ TL+ELADLL+CSRRHMR LLN MQA GWLTW+AE G
Sbjct: 1   MPSGRLQQQFIRLWQCCDGKTQDTTLNELADLLNCSRRHMRTLLNTMQARGWLTWEAEVG 60

Query: 61  RGKRSQLIFCYTGLALQQQRAEDLLEQDRIDQLVQLVGDKNQVRQMISAHLGRSFRQGKH 120
           RGKRS+L F YTGLALQQQRAEDLLEQDRIDQLVQLVGDK+ VRQM+ +HLGRSFRQG+H
Sbjct: 61  RGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKSAVRQMLISHLGRSFRQGRH 120

Query: 121 ILRVLYYRPLLNLLPGSPLRRSETHIARQIFNGLTRINEENGEIEPDIAHHWQQTSPLHW 180
           ILRVLYYRP+ NLLPG+ LRRSETHIARQIF+ LTR+NEENGE+E DIAHHWQQ SPL W
Sbjct: 121 ILRVLYYRPMHNLLPGTALRRSETHIARQIFSSLTRVNEENGELEADIAHHWQQISPLLW 180

Query: 181 RFFLRPAIRFHHGRELEMEDVLATLERQRPHPLFSHIAQIDSPAPWTLDIRLSQPDEGLP 240
           RF+LRP I FHHGRELEMEDV+++L R    PL+SHI +IDSP  WTLDI LSQPD  LP
Sbjct: 181 RFYLRPGIHFHHGRELEMEDVISSLTRINTLPLYSHITKIDSPTAWTLDIHLSQPDRWLP 240

Query: 241 WLLGSVSAMILPREWPTLHDFARQPVGTGPYRVIRNQESQLKIEAFDDYFGFRALIDDVS 300
           WLLG V AMILPR+W TL +FA  P+GTGPY V RN  +QLKI AFDDYFG+RALID+V+
Sbjct: 241 WLLGQVPAMILPRKWETLANFASHPIGTGPYAVRRNTPNQLKILAFDDYFGYRALIDEVN 300

Query: 301 IWVLPDISDELVYAGVRLQGG-STDEVQEESRLEEGCYYLLFDQRSEQGRNEAVRRWVSY 359
           +WVLPDIS+E    G+ L+G     E   ESRLEEGCYYLLFD R+ +G +  VR WVS+
Sbjct: 301 VWVLPDISEEPA-CGLMLEGPIQGGEKAIESRLEEGCYYLLFDARTPRGAHPQVREWVSH 359

Query: 360 LFNPIALLNHAGVGYQRYWFPAYGLLPRWHHRRDLTPVEKPPDLTHLTLTWYSQHVEHEG 419
           + +P  LL HA    Q+ WFPAYGLLPRWHH R   P EKP  L  LTLT+Y +H+EH  
Sbjct: 360 VLSPTNLLYHADEPLQQLWFPAYGLLPRWHHARP-GPGEKPAGLETLTLTFYREHIEHRV 418

Query: 420 IANALRPLLAEHGVTLETREISYESWYQGETESDIWLGSVNFTLPLNYSLFAQLYEIPLL 479
           IA  +  LLAEH V L  +EI Y+ W+ GE ESDIWL S NFTLPL++SLFA L E+PLL
Sbjct: 419 IARIMSALLAEHQVHLHIQEIDYDQWHAGEIESDIWLNSANFTLPLDFSLFAHLCEVPLL 478

Query: 480 HHCLAIDWHGDAARWREKALPLAEWSKQLVDEAGLHPLFHHWLLLEGQRSMRGVRMNTLG 539
            +C+  DW GDAA+WR   + LA W +QL+    + PL HHWL+++GQRSMRG+RMNTLG
Sbjct: 479 QNCIPRDWQGDAAQWRAGEMNLANWCQQLLANKAIVPLIHHWLIIQGQRSMRGLRMNTLG 538

Query: 540 WFDFKSAWFAPP 551
           WFDFKSAWFAPP
Sbjct: 539 WFDFKSAWFAPP 550