Pairwise Alignments

Query, 313 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH from Pantoea sp. MT58

Subject, 315 a.a., Ribosomal RNA small subunit methyltransferase H from Pseudomonas putida KT2440

 Score =  318 bits (816), Expect = 8e-92
 Identities = 170/315 (53%), Positives = 225/315 (71%), Gaps = 9/315 (2%)

Query: 1   MQENFKHTTVLLDEAVNGLNIREDGIYIDGTFGRGGHSRLILSQLGEKGKLIAIDRDPQA 60
           +   F H TVLLDEAV  L +R DG Y+DGTFGRGGHSRLILS+LG +G+L+  D+DPQA
Sbjct: 3   IDSGFNHITVLLDEAVEALALRADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQA 62

Query: 61  IAAAAEIT--DPRFSIIHGPFSALAEYVSERDLVGKIDGILLDLGVSSPQLDDAERGFSF 118
           IA    +   D RF I+   F+ L   V+ R L GK+ G+LLDLGVSSPQLDD ERGFSF
Sbjct: 63  IATGQALAAEDGRFVIVQRSFAELGAEVAARGLHGKVSGVLLDLGVSSPQLDDPERGFSF 122

Query: 119 MRDGPLDMRMDPSRGHSAAEWLLHAEEADIAFVLKTYGEERFAKRIARAIVERNREQPMT 178
           + DGPLDMRM+P +G SAAE++  A   +IA V K YGEERFA R+ARA+VER  +QP T
Sbjct: 123 LNDGPLDMRMNPDQGVSAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFT 182

Query: 179 RTRELAEVISIAMPVKDKFKHPATRSFQAIRIWINSELEEIDIALKGAVQVLAPQGRLSV 238
           RT +LAEV+ +A P  +K K+PATR+FQ +RI +N+EL +++  L+ A+  L   GRL+V
Sbjct: 183 RTADLAEVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLAV 242

Query: 239 ISFHSLEDRLVKRFMRDQSRG--PQVPAGIPMTEHQLRALGGRELKLLGKMS-PGDAEVS 295
           ISFHSLEDR+VK FMR   +G    +P  +P+ +H++      ++KL+GK     +AE+ 
Sbjct: 243 ISFHSLEDRIVKLFMRKLVKGEADNLPRNLPV-QHKVFE---PKIKLIGKAQFASEAELK 298

Query: 296 ENPRARSSVLRIAEK 310
            NPR+RS+V+R+AEK
Sbjct: 299 ANPRSRSAVMRVAEK 313