Pairwise Alignments

Query, 313 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH from Pantoea sp. MT58

Subject, 306 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  199 bits (505), Expect = 9e-56
 Identities = 126/311 (40%), Positives = 174/311 (55%), Gaps = 18/311 (5%)

Query: 7   HTTVLLDEAVNGLNIREDGIYIDGTFGRGGHSRLILSQLGEKGKLIAIDRDPQAIAAAAE 66
           H  VLL+E+V  L I+ +G+Y+D TFG GGHS  IL +L   GKL + D+D  A   +  
Sbjct: 4   HRPVLLEESVEALAIKPEGVYVDVTFGGGGHSARILQEL-TSGKLYSFDQDSDAQEQSQR 62

Query: 67  ITDPRFSIIHGPFSALAEYVSERDLVGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
           +  P F  +   F  L +Y+     V K+DGIL DLGVSS Q +  ERGFS   DGPLDM
Sbjct: 63  LEGPTFQFVRANFRDLKKYLRLYG-VKKVDGILADLGVSSHQFNVPERGFSTRFDGPLDM 121

Query: 127 RMDPSRGHSAAEWLLHAEEADIAFVLKTYGEERFAKRIARAIVERNREQPMTRTRELAEV 186
           RM+   G +A E L    E  +  +   YGE + AK +AR +VE+   QP     E  + 
Sbjct: 122 RMNSDAGITAREVLETYSEEQLHRIFGIYGEVKNAKTLARTVVEKRNRQPFESIAEFKQA 181

Query: 187 ISIAMPVKDKFKHPATRSFQAIRIWINSELEEIDIALKGAVQVLAPQGRLSVISFHSLED 246
           IS   P K K      + FQA+RI +N E++ ++  L+ A +VL P GRLSVIS+HSLED
Sbjct: 182 ISSCTP-KGKENKYLAQVFQALRIEVNDEMKALEEMLEQAAEVLKPGGRLSVISYHSLED 240

Query: 247 RLVKRFMRDQSRGPQVPAGIPMTEHQLRALGGRELKLL-----GKMSPGDAEVSENPRAR 301
           R+VK F+       +V           + L G E+K L       ++P D E+ +N R+R
Sbjct: 241 RMVKNFIAKGKFFGEVE----------KDLFGNEIKPLEAVYRKPITPSDEELLQNSRSR 290

Query: 302 SSVLRIAEKTD 312
           S+ LR+AEK +
Sbjct: 291 SAKLRVAEKKE 301