Pairwise Alignments

Query, 495 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Pantoea sp. MT58

Subject, 513 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase (EC 6.3.2.13) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  297 bits (760), Expect = 7e-85
 Identities = 192/499 (38%), Positives = 265/499 (53%), Gaps = 27/499 (5%)

Query: 20  RPLRDMTLDSRIAASGDLFVAVAGHQVDGRRFIPQAIAQGVAAVVAEAEGEAADGEIREM 79
           R +R +  DSR   +GD FVA  G   DGRRF+  A+  G  A + E +G  A G   E 
Sbjct: 17  RGVRALHCDSRRVGAGDAFVAWPGAATDGRRFVAGALQAGAVAALVEQDGAQAYGFDDER 76

Query: 80  HGVPVIYLAQLPQRLSALAGRFYQQPGEKQTLIGVTGTNGKTTTTQLLAQWATLLGETSA 139
               V+ +  L     A+AG F+  P     ++ +TGTNGKT+T    AQ  +      A
Sbjct: 77  ----VVAVPGLKASAGAIAGAFHGTPSAALDMVAITGTNGKTSTAWWTAQLLSFCAMPCA 132

Query: 140 VMGTVGNGLVGHLSAAEN-------TTGSAVDVQHLLNDLAEKGASLTAMEVSSHGLVQH 192
           V+GT+G G       A++       TT   V +Q  L    + G    A+E SS G+V+ 
Sbjct: 133 VVGTLGMGRPPRPGQADSPLVATGLTTPDPVMLQAELRRFVDSGLKACAVEASSIGIVEG 192

Query: 193 RVAALPFAAAVFTNLSRDHLDYHGDMQSYESAKWLLFSEHQVGQAILNADDEVGRRWLAR 252
           R+ A     AVFTN ++DHLD+HG M++Y +AK  LF    +  A++N DD  G    A 
Sbjct: 193 RLNATQLRVAVFTNFTQDHLDFHGSMEAYWTAKAELFDWPGLASAVVNIDDARGADLAAT 252

Query: 253 LPDAVAVTMENNLQPGCHGRW-LKADAVEYHDNGAHIRFSSSWGNGE------INSPLMG 305
           L           ++ G HGR  L A  + +  +G  ++       G       ++ PL+G
Sbjct: 253 LAQRGLDLWTVAIEAGHHGRARLFAQDLSFTHSGMALQVGERDARGRTLAQHALSLPLVG 312

Query: 306 AFNVSNLMLALATLLSLDYPLATLINVAPQLQPVNGRMEVFSA--AGKPTVVVDYAHTPD 363
            +NVSNL+  LA+  +L   LA  +     L PV GRME  +A  + +P V+VDYAHTPD
Sbjct: 313 RYNVSNLLCVLASARALGVALADAVQACAALTPVPGRMEQAAAGVSDQPLVLVDYAHTPD 372

Query: 364 ALEKALEAARLHCK---GKLWCLFGCGGDRDKGKRPLMGAIAEQYADVVVITDDNPRSED 420
           ALEKAL+A +   +   G LW + GCGGDRD GKRPLM A AE+ A   V+T DNPRSED
Sbjct: 373 ALEKALQALQPLARQRGGALWVVVGCGGDRDAGKRPLMAAAAEREAQRPVLTSDNPRSED 432

Query: 421 PQAIVNDILTGLLDPGRARLVSGRAQAVTNTIMQAQPDDIVLVAGKGHEDYQIIGNRRLD 480
           P AI+  ++ GL  P  A +   RAQA+   + +A   D+VL+AGKGHEDYQ +   +  
Sbjct: 433 PLAILRQMVAGLASPDAALVEPDRAQAIALAVARADARDVVLIAGKGHEDYQDVKGVKKP 492

Query: 481 YSD----RATVAALLGGAA 495
           +SD    RA +A   G  A
Sbjct: 493 FSDLLHARAALAQRRGQGA 511