Pairwise Alignments

Query, 351 a.a., DNA polymerase IV from Pantoea sp. MT58

Subject, 398 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  169 bits (428), Expect = 1e-46
 Identities = 109/340 (32%), Positives = 182/340 (53%), Gaps = 16/340 (4%)

Query: 2   RKIIHVDMDCFYAAVEMRDNPQLRDIPIAIGGSRERRGVISTANYPARKYGVRSAMPTGM 61
           R I+H+D+D F+ +VE   + +L+  PI IGG+ +R GV+++ +Y AR YG+ SAMP   
Sbjct: 7   RSIVHMDLDSFFVSVERLFDNRLKGRPILIGGTGDR-GVVASCSYEARVYGIHSAMPMRT 65

Query: 62  ALKLCPHLRLLPGRFDAYKEASAQIRDIFTRYTPLIEPLSLDEAYLDVTDSPHCHGSATL 121
           A +LCP   ++ G  + Y + S +I +I     PL E  S+DE Y+D +      G    
Sbjct: 66  ARQLCPEALIIRGDSERYSQKSHEITEIIRESVPLFEKSSIDEFYIDYSGMDRFFGCFK- 124

Query: 122 MAQAIRATIYRETGLTASAGIAPIKFLAKIASDLNKPDGQFVITPPEMAGFLLTLPLAKI 181
           MA  +R  I +ETGL  S G++  K ++K+A+   KP+ +  +       FL  L + KI
Sbjct: 125 MAHELRQKIIKETGLPISLGLSENKTVSKVATGEAKPNNEKEVPYGSEKPFLAPLSIRKI 184

Query: 182 PGVGKVSAKKLEEMGLVTCGDVQKADLALLLKRFGKFGRVLWERSNGIDDRSVIVERERK 241
           P +G+ +A  L  MG+     +Q     LL   FGK G++LW ++NGID   V+   E K
Sbjct: 185 PMIGEKTAHSLYGMGVKKIQTLQTMPQELLESAFGKNGKLLWNKANGIDKSLVVPYSEAK 244

Query: 242 SLGVERTLAEDISDWDACLEIID-FLYAELDRRLTQIRPDRQV-ARQGVKLKFSDFQQTT 299
           S+  E T ++D  D    +++++  L A  ++  T++R + Q+     VK+++SDF   T
Sbjct: 245 SISTENTFSQDTID----VKMLEATLVAMTEQLATKLRKNHQLTCCASVKIRYSDFDTHT 300

Query: 300 QEHIWPVLNKEDMIA-----IARKTWDERRAGRGVRLVGL 334
            +   P    +  +      + RK ++ R     +RL+G+
Sbjct: 301 MQQRIPYTAADHTLLPVVKDLFRKLYNRRML---IRLIGI 337