Pairwise Alignments

Query, 308 a.a., cytochrome o ubiquinol oxidase subunit II from Pantoea sp. MT58

Subject, 313 a.a., ubiquinol oxidase subunit II from Pseudomonas simiae WCS417

 Score =  367 bits (941), Expect = e-106
 Identities = 178/315 (56%), Positives = 235/315 (74%), Gaps = 9/315 (2%)

Query: 1   MRLSKYNKSLGILSLIAGTLLMSGCDSALLNPKGQIALEQRSLILTAFGLMLIVVIPAVL 60
           M  ++Y + LG L L+   L++ GC   L++PKGQI L+QR+LI+TA  LML+VV+P ++
Sbjct: 1   MSKNRYPRLLGFLPLLGMMLMLGGCKWTLMDPKGQIGLDQRNLIITATLLMLLVVVPVII 60

Query: 61  MAVVFAWKYRASNTNAKYSPNWSHSNKVEAVVWTIPILIIIFLSVLTWKSTHALEPSKPL 120
           M   FAWKYRASNTNA Y+P WSHS K+E  VW +PILIII L  +T+KSTH L+P +PL
Sbjct: 61  MTFAFAWKYRASNTNATYAPKWSHSTKIEIAVWLVPILIIIALGYITYKSTHELDPYRPL 120

Query: 121 QSDVKPVEIDVVALDWKWLFIYPEQGIATVNQIAFPANTPVNFKITSNSVMNSFFIPTLG 180
           +SDVKP+ I+VVALDWKWLFIYP+ GIATVN+I FP NTP+NF+ITS++VMNSFFIP LG
Sbjct: 121 ESDVKPINIEVVALDWKWLFIYPDLGIATVNEIQFPENTPLNFRITSDAVMNSFFIPALG 180

Query: 181 SQIYAMAGMQTKLHLIANEPGIFDGISANFSGRGFSGMKFKAIATKDDAEFQQWVAKVKA 240
            QIYAMAGMQT+LHLIANE    +GISAN+SG GF+GMKFKAI+T  +  F  WVA+VKA
Sbjct: 181 GQIYAMAGMQTRLHLIANEKAEMEGISANYSGAGFTGMKFKAISTSQEG-FNAWVAEVKA 239

Query: 241 APNTLTTMDDFEKVAVPSENHPVEYFSSADPKLFMQVIDKFK-------MSHGKMDMPQH 293
           AP  L    +++ +  PS+N+PV  +S+ +P LF +++DK++       + H K ++   
Sbjct: 240 APKQL-DQAEYDALTKPSQNNPVALYSAYEPNLFQKIVDKYEGMKPGKPVKHEKKEVAAV 298

Query: 294 EGMDMSHAASAGAEE 308
           EG D    ++AGAEE
Sbjct: 299 EGSDTGSHSTAGAEE 313