Pairwise Alignments

Query, 262 a.a., endonuclease VIII from Pantoea sp. MT58

Subject, 269 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Pantoea sp. MT58

 Score = 77.4 bits (189), Expect = 3e-19
 Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 19/274 (6%)

Query: 1   MPEGPEIRRVADKLEAAIVGEPLTEAWFAFPQLK---TYEPSLIGEQ-VQAIETRGKALL 56
           MPE PE+      +E  +VGE +  A     +L+   + E   + +Q V +++ R K LL
Sbjct: 1   MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRWPVSQEILALSDQPVLSVQRRAKYLL 60

Query: 57  THFSNGLTLYSHNQLYGVWRIVKPDTELNTTRQLRVRLATKGKAILLYSASDI--ELLNA 114
               +G  +  H  + G  R++    EL   +   V L      +L Y+        L +
Sbjct: 61  LELPHGWIII-HLGMSGSLRVLSE--ELPAAKHDHVDLVMSNGKVLRYTDPRRFGAWLWS 117

Query: 115 DTLAAHPFLTRIGPDVLNSALTVEEVRERLLSPRFRRRQFSGLLLDQAFLAGLGNYLRAE 174
             LA    L  +GP+ L+       + ++    R   +Q+   L+D   + G+GN   +E
Sbjct: 118 SDLAGSSVLAHLGPEPLSEQFDGAYLFDKSRGKRTLIKQW---LMDNKVVVGVGNIYASE 174

Query: 175 ILWLAQLLPNHRAQDLSDDQLTAFSEALLSVPRHAYRMRGTMKKYHEEA-------AFQF 227
            L+ A ++P+  A  LS  +       + +V   +    GT  +   +        A Q 
Sbjct: 175 SLFTAGIVPDRAAGSLSQAESELLVNTIKAVLLRSIEQGGTTLRDFLQTDGKPGYFAQQL 234

Query: 228 EVFHRQGKQCRRCGTVIEKGTLSSRPFYWCPGCQ 261
           +V+ R G+ CR CGT I  G    R  YWCP CQ
Sbjct: 235 QVYGRAGEPCRACGTPIVSGRHGQRSTYWCPNCQ 268