Pairwise Alignments

Query, 379 a.a., L,D-transpeptidase family protein from Pantoea sp. MT58

Subject, 310 a.a., L,D-transpeptidase linking Lpp to murein from Escherichia coli BL21

 Score =  389 bits (998), Expect = e-113
 Identities = 185/305 (60%), Positives = 231/305 (75%), Gaps = 2/305 (0%)

Query: 1   MKIIRAFASIALALAAFSQSAFAVVYPLPPANSRLIGENIEITVPEDSKLPLEAFAAQYQ 60
           M+ +    S AL  A  S ++ AV YPLPP  SRL+G++  +TVP+ +  PLE FAAQY 
Sbjct: 1   MRRVNILCSFALLFA--SHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYG 58

Query: 61  MGLSNMLEANPGVDVYLPKAGSKMIIPQQLILPDAPREGIVINSAEMRLYYYPKGSKTVV 120
            GLSNMLEANPG DV+LPK+GS++ IPQQLILPD  R+GIV+N AEMRLYYYP  S TV 
Sbjct: 59  QGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVE 118

Query: 121 VLPIGIGELGKDTPISWTTAVERKKDGPTWTPTKGMHADYAARGETLPAVFPAGPDNPMG 180
           V PIGIG+ G++TP +W T VERK++ PTWTPT     +YA RGE+LPA  PAGPDNPMG
Sbjct: 119 VFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMG 178

Query: 181 LYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRADDIKWLYQNVPVGTRVQFVDQPVKAT 240
           LYA+YIGRLYAIHGTNANFGIGLRVS GC+RLR DDIK+L+ NVPVGTRVQ +DQPVK T
Sbjct: 179 LYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYT 238

Query: 241 VEPDGSRYVEVHNPLSTTEEQFNSRELVPITLTQAVSKIVVDASVNQDQVNAAIQSRTGM 300
            EPDGS ++EVH PLS    ++ S   VP+ +T ++   +    V+ ++ NAA+Q R+GM
Sbjct: 239 TEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGM 298

Query: 301 PVKVN 305
           PV+++
Sbjct: 299 PVQIS 303