Pairwise Alignments

Query, 263 a.a., aliphatic sulfonate ABC transporter permease SsuC from Pantoea sp. MT58

Subject, 530 a.a., ABC transporter permease from Pseudomonas fluorescens SBW25

 Score =  178 bits (451), Expect = 2e-49
 Identities = 100/247 (40%), Positives = 141/247 (57%), Gaps = 2/247 (0%)

Query: 10  DTLLPWLLPTLLVVVWQIASQTGWLSNRILPAPEKIVTTFWQLTASGELWQHLAISSWRA 69
           + LLPWLLP  L  +W +AS+  W+S +ILP P  + ++  +L A GELW HLAIS  R 
Sbjct: 25  ERLLPWLLPVTLFALWWLASRNHWMSEQILPPPSLVWSSAVEL-AGGELWSHLAISLQRL 83

Query: 70  LIGFSIGGSLGLLLGLITGTSKTGERLLDTSLQMLRNVPHLALIPLVILWFGIDESAKIF 129
             G   G   G LLG + G S   ERL+  +   L  VP LA IPL +++FGI E+ K+ 
Sbjct: 84  SWGLLAGIGAGALLGAVLGFSARAERLVFPTFSALSQVPTLAWIPLFMVFFGIGETLKLV 143

Query: 130 LVALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGALPNIMVGVRFAL 189
           ++    + P+ L+T  G+R+    L E AR   L    L  ++ILP ALP  M GVR AL
Sbjct: 144 VLVKAIVVPVTLHTLVGVRDAQPQLREAARVLRLPTHLLIRRLILPAALPAFMAGVRLAL 203

Query: 190 GLMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVAALLLERVW 249
              W +L+  E +++S GIGYL + AR+    D+V V I++  + G + D     L+R W
Sbjct: 204 AAGWTSLLAVELLASSEGIGYLMVWARQLFMLDIVFVCIVVIGVFGVVMDRGIGWLDRKW 263

Query: 250 LRW-HPA 255
           + W HPA
Sbjct: 264 VHWPHPA 270



 Score =  147 bits (371), Expect = 5e-40
 Identities = 84/245 (34%), Positives = 131/245 (53%), Gaps = 1/245 (0%)

Query: 12  LLPWLLPTLLVVVWQIASQTGWLSNRILPAPEKIVTTFWQLTASGELWQHLAISSWRALI 71
           L PW+LP LL+ +WQ+A+Q GW+   IL +P  ++ T       G L   L  S  R+L 
Sbjct: 286 LQPWVLPLLLLALWQVATQQGWVDPNILVSPWVVLHTTVAGVVDGNLSGALGTSLGRSLG 345

Query: 72  GFSIGGSLGLLLGLITGTSKTGERLLDTSLQMLRNVPHLALIPLVILWFGIDESAKIFLV 131
           G  +GG +G  +GL  G S+  ER+L  +L  LR +   A +PL+  WFG+ E AK   +
Sbjct: 346 GLLLGGGVGFAMGLWLGLSRRSERVLGPTLSALRQIAIFAWVPLLTAWFGLGELAKWVFI 405

Query: 132 ALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGALPNIMVGVRFALGL 191
           AL   FP+++ T   + N+   L E A+   L+ +    +++LPGA   I  G+R +L  
Sbjct: 406 ALAAFFPLFIATQRSVLNLSPQLNEAAQVLRLNLFQRLRRLVLPGAAAGIFAGLRLSLIY 465

Query: 192 MWLTLIVAETISASS-GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVAALLLERVWL 250
            WL  I AE    S+ GIG L + A++ L+ D+++  ++L  L G   ++    +E    
Sbjct: 466 AWLGTIGAEYFMPSNGGIGSLMIGAQQLLRMDLIMSGMLLVGLTGAALNLIGQRIETRAT 525

Query: 251 RWHPA 255
           RW  A
Sbjct: 526 RWRHA 530