Pairwise Alignments

Query, 547 a.a., intermembrane transport protein PqiB from Pantoea sp. MT58

Subject, 767 a.a., mammalian cell entry protein from Pseudomonas simiae WCS417

 Score =  173 bits (438), Expect = 2e-47
 Identities = 97/312 (31%), Positives = 174/312 (55%), Gaps = 12/312 (3%)

Query: 9   AKVEQIKRWSPVWIVPIVTLLIGGWILFYHFSHQGPEVTLITENAEGIVAGKTTIKSRSV 68
           AK      WS +W++P++ L+IGGW+ +  +S QG ++ +  E+ EGI   KT +  + +
Sbjct: 7   AKTRPASNWSAIWVLPLIALIIGGWLGWRAYSQQGIDIQVRFESGEGIQVNKTEVVYKGM 66

Query: 69  DVGIVESAVLSDDLHHVEIKA--RLNAGMGKLLHKDSVFWVVKPQIGREGISGLGTLLSG 126
            VG V++  L D+ ++  + A   +N  + + L  ++ FW+VKP +   GI+GL TL+SG
Sbjct: 67  PVGKVKALALDDEGNNRGVIATIEMNKDVDQYLKTNTRFWLVKPSVSLAGITGLETLVSG 126

Query: 127 AYIELQPGTKSEAPEQFNLLDAPPLAPPDAK-GIRIILDSKKAGQLNPGDPVLFRGYRVG 185
            YI   PG      +   L + PPL+  DAK G+ + + + + G LN G PV ++  +VG
Sbjct: 127 NYIAASPGDGEPTRKFKALSEEPPLS--DAKPGLHLTVKADRLGSLNRGSPVFYKQIQVG 184

Query: 186 TVETSVFDTDKRMMTYQLFVAAPYDRLVTTNVRFWKDSGIAVDMSASGMRVEMGSLTTLF 245
            V++ +   D+  +  ++++   Y  LV  + RFW  SGI++D + SG++V   SL+++ 
Sbjct: 185 QVKSYLLSEDQSTVEIKVYIEPTYASLVRKHTRFWNASGISIDANLSGVKVRSESLSSIV 244

Query: 246 SGGVSFDVPDGWELGEPAQNKSDYHLFDDQRSIQDSLYTNHIDYLMFFTDSIRGLQAG-A 304
           +GG++F  P+  +   P      + L++D  +    +        +  TD   GLQAG  
Sbjct: 245 AGGIAFATPENRKDSPPTDPSLPFRLYEDFDAAAAGIRVK-----VKLTD-FEGLQAGRT 298

Query: 305 PVEFRGIRLGTV 316
           PV ++GI++G++
Sbjct: 299 PVMYKGIQVGSL 310



 Score =  137 bits (344), Expect = 2e-36
 Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 3/236 (1%)

Query: 40  SHQGPEVTLITENAEGIVAGKTTIKSRSVDVGIVESAVLSDDLHHVEIKARLNAGMGKLL 99
           +  G  VT+  + A+G+  G T ++ + +DVG +ES  LS D+  V + AR+     ++ 
Sbjct: 516 NQHGTLVTIKVDRADGMRPG-TPVRFKGLDVGKIESVDLSADMQSVLLSARITQVADRIA 574

Query: 100 HKDSVFWVVKPQIGREGISGLGTLLSGAYIELQPGTKSEAPEQ-FNLLDAPPLAPPDAKG 158
              S FWVVKP++G    S L TL++G YIE+ P  K+  P++ F  LD PP A     G
Sbjct: 575 RAGSQFWVVKPELGLMKTSNLETLVTGQYIEVLPAAKNAGPQKSFVALDQPPEAVHQEAG 634

Query: 159 IRIILDSKKAGQLNPGDPVLFRGYRVGTVETSVFDTDKRMMTYQLFVAAPYDRLVTTNVR 218
           + + L + + G L  G PV +R   VG V           +   + +   Y  LV +  R
Sbjct: 635 LSLTLSAARRGSLKEGVPVTYREVTVGKVTGYELGQTADRVLIHILIEPKYAPLVRSGSR 694

Query: 219 FWKDSGIAVDMSA-SGMRVEMGSLTTLFSGGVSFDVPDGWELGEPAQNKSDYHLFD 273
           FW  SG  +D     G  V   SL TL +GG++F  PDG  +G PA+ +  + LFD
Sbjct: 695 FWNTSGFGLDFGLFKGATVRTESLETLVAGGIAFATPDGERMGNPARPQQTFALFD 750



 Score =  132 bits (331), Expect = 6e-35
 Identities = 101/363 (27%), Positives = 171/363 (47%), Gaps = 29/363 (7%)

Query: 43  GPEVTLITENAEGIVAGKTTIKSRSVDVGIVESAVLSDDLHHVEIKARLNAGMGKLLHKD 102
           G  V +   + EG+ AG+T +  + + VG +++  +  DL     +  L+      L +D
Sbjct: 280 GIRVKVKLTDFEGLQAGRTPVMYKGIQVGSLKTLKVDPDLSSANAELTLDPLAEDYLVQD 339

Query: 103 SVFWVVKPQIGREGISGLGTLLSGAYIELQPGTKSEAPEQ--FNLLDAPPLAPPDAKGIR 160
           + FWVVKP I   GI+GL  L+ G YI ++PG K  AP++       APPL    + G+ 
Sbjct: 340 TQFWVVKPSISLAGITGLEALVKGNYIAIRPGDKGTAPQREFVARAKAPPL-DLRSPGLH 398

Query: 161 IILDSKKAGQLNPGDPVLFRGYRVGTVETSVFDTDKRMMTYQLFVAAPYDRLVTTNVRFW 220
           ++L +   G L+ G P+L++  +VG+V++  F    + +   + +   Y+ LV  + RFW
Sbjct: 399 MVLFTDNLGSLDVGSPILYKQVKVGSVQSYQFSRKNKQLVIGVHIEKEYENLVNGSTRFW 458

Query: 221 KDSGIAVDMS-ASGMRVEMGSLTTLFSGGVSFDVPDGWELGEPAQNK-SDYHLFDDQRSI 278
             SG+ +      G++V+  SL +L +GG++F+ P   E   P + +   + LF D+ + 
Sbjct: 459 NASGVTLTGGLTGGIQVKSESLASLMAGGIAFETP---EPNVPLKKRIPRFRLFADREAA 515

Query: 279 QDSLYTNHIDYLMFFTDSIRGLQAGAPVEFRGIRLGTVSEAPLMKAGLDQALNNDYRVPV 338
                  H   +    D   G++ G PV F+G+ +G +    L  A +   L +     V
Sbjct: 516 -----NQHGTLVTIKVDRADGMRPGTPVRFKGLDVGKIESVDL-SADMQSVLLSARITQV 569

Query: 339 LIRIEPDRFISRLGENFDLEQHLQDGKKRGLRATLKTGNLLSGALYVDLDFYDNAPAYKG 398
             R      I+R G  F + +      + GL  T     L++G     L    NA    G
Sbjct: 570 ADR------IARAGSQFWVVK-----PELGLMKTSNLETLVTGQYIEVLPAAKNA----G 614

Query: 399 PQK 401
           PQK
Sbjct: 615 PQK 617