Pairwise Alignments

Query, 318 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Pantoea sp. MT58

Subject, 330 a.a., RluA family pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  167 bits (423), Expect = 3e-46
 Identities = 109/308 (35%), Positives = 169/308 (54%), Gaps = 12/308 (3%)

Query: 8   VHFVAITAENAGQRIDNFLRTQLKGVPKSMIYRIVRKGEVRVNKKRVKPEYKLEEGDEVR 67
           V  + +  E A  R+D + +     V   ++ + +R G VRV+ KR K   +L+ G  +R
Sbjct: 4   VQTLTVAEEEAEIRLDRWFKRHFPSVGHGLLEKWLRAGNVRVDGKRAKSNQRLDAGQIIR 63

Query: 68  IPPVRVAERDEDAVSP-----KLAKVASLADAILFEDESLLVMNKPSGTAVHGGSGLSFG 122
           +PP+  AE     V P     K+A++  L DA+L+ D+ ++ +NKP G AV GG+G++  
Sbjct: 64  VPPLPTAEAPPREVRPAPVDEKIARM--LQDAVLYMDDEVIALNKPPGLAVQGGTGMADK 121

Query: 123 VIEG-LRALRPEARFLELVHRLDRDTSGILLVAKKRSALRSLHEQLREKGMQKDYLALVR 181
            ++  L AL  +    +LVHRLD+DTSG+LL+ +  +A   L    + +  +K Y ALV 
Sbjct: 122 HLDAWLDALCFDGGRPKLVHRLDKDTSGVLLLGRTANATAKLAAAFKSRSARKCYWALVA 181

Query: 182 GNWPSHLKVVQAPLLKNILQSGERVVRVSSEGKASETRFK-VEERFDFATLVKASPVTGR 240
           G        + APL K   ++GE+V     +GK + T ++ V+     A  ++  P TGR
Sbjct: 182 GVPRYPQGRIDAPLAKLPGKAGEKVAVDKEDGKHAVTYYRVVDATLKRAAWLELEPRTGR 241

Query: 241 THQIRVHTLHAGHPIAFDDRYGERDFDSQLASTGLKR-LFLHAAALTFTHPGTGEVMRVE 299
           THQ+R H L  G PI  D +YG +  D+ +  TG+ R L LHA A+   HP TG+V+ V 
Sbjct: 242 THQLRAHCLLLGTPIMGDGKYGGQ--DALVEGTGVSRKLHLHARAVRLPHPRTGKVLEVV 299

Query: 300 APLDDGLK 307
           APL   +K
Sbjct: 300 APLPPHIK 307