Pairwise Alignments

Query, 411 a.a., DotU family type VI secretion system protein from Pantoea sp. MT58

Subject, 286 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  159 bits (401), Expect = 1e-43
 Identities = 86/197 (43%), Positives = 117/197 (59%), Gaps = 4/197 (2%)

Query: 19  NVLVAAANPLINAIPQIRHSVSHDDPAQLRQQLIDQIRRFELSCQQSGLGYEVIIGARYC 78
           N+L+AAA  L++ + Q++ S + +    L  QL   I  FE      G     ++ ARY 
Sbjct: 60  NMLLAAAWELLSQVAQLKASPARESLQALNDQLSSAISAFEAHALHLGAETSQVMSARYV 119

Query: 79  LCTALDEAAALTPWGSRGVWTSNGLLVTFHNETWGGEKFFQLLAKLSQNPRRHILMLELI 138
           LC+ +DEA   TPWGS   W+   LL  FHNET+GGEKFFQLL +LS++P +HI MLEL+
Sbjct: 120 LCSVIDEAVVTTPWGSCSDWSKRSLLSRFHNETFGGEKFFQLLERLSRDPVKHIAMLELM 179

Query: 139 YFCLLLGFEGRYRVLDNGRSQLETIKQRLLQMIRSVRGNYATALSPHPTDQPVLRKLWRP 198
           Y CL LGFEG+YRV++ GR QLE ++  + + IR VRG+    LS  P      R   R 
Sbjct: 180 YLCLALGFEGKYRVMERGRGQLEAVQDAVYRQIRHVRGD-RVPLSISPERGKAPRGRIRI 238

Query: 199 MIPLWACAAVAGLAACL 215
           +  +W   A  G+ ACL
Sbjct: 239 VSAMW---AAVGVLACL 252