Pairwise Alignments

Query, 411 a.a., DotU family type VI secretion system protein from Pantoea sp. MT58

Subject, 291 a.a., putative type 4/6 secretion system from Pseudomonas putida KT2440

 Score =  112 bits (279), Expect = 2e-29
 Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 8/218 (3%)

Query: 19  NVLVAAANPLINAIPQIRHSVSHDDPAQLRQQLIDQIRRFELSCQQSGLGYEVIIGARYC 78
           N+++ AA PL   + ++R      +   + QQ+  QI       +Q G     ++   Y 
Sbjct: 69  NLMLDAAAPLFGLVMRLRTLDELPNIKDVHQQVRIQIDSIREEIRQHGYEPAQLLAYSYG 128

Query: 79  LCTALDEAAALTPWGSRGVWTSNGLLVTFHNETWGGEKFFQLLAKLSQNPRRHILMLELI 138
           LC  +DEA    PWG    W+   LL  FH+ETWGGEK F ++ +L Q P+R+  +LE +
Sbjct: 129 LCLYIDEAVMERPWGKSSCWSHEPLLSIFHDETWGGEKIFTVITRLMQEPKRYQDVLEFM 188

Query: 139 YFCLLLGFEGRYRVLDNGRSQLETIKQRLLQMIRSVRG-NYATALSPHPTDQP---VLRK 194
           YF L LG +G+Y +   G   L  +  +L  +IR +RG        P+    P    + +
Sbjct: 189 YFALCLGLKGKYALAPKGEETLNALIHQLHGIIRELRGPTPEEVCDPYTNVAPRNFRMSR 248

Query: 195 LWRPMIPLWACAAVAGLAACLFYIVLNWRLGDYTSPVL 232
           +W    P W+   ++ +A  + Y + ++RL   T+ VL
Sbjct: 249 IW----PWWSPLVISAIAMAVAYGIYSYRLHLITTEVL 282