Pairwise Alignments

Query, 338 a.a., type VI secretion system protein TssA from Pantoea sp. MT58

Subject, 361 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 83/329 (25%), Positives = 144/329 (43%), Gaps = 31/329 (9%)

Query: 1   MNTEALLAPVSEENPGGDNLEYDADFQAMEQASAGKAEQQF---GDTIIPAEPADWNKVE 57
           ++   L+AP+  E   G++L + A F  +++A   +A+  +   GD     + ADW +V 
Sbjct: 8   LSLATLVAPI--EGGSGEDLSFSALFDQIKEAR--RADPDYLTQGDWQTDLKTADWEQVI 63

Query: 58  KL-AIALLGRSKDLRVMLALTHAWTELKGLPGYAQGLKLIEQALLLYWEPLWPRLEEYGE 116
            L A  L  +SKDL ++  L     + +   G   GL+L EQ L+ +WE L+P LE+ G 
Sbjct: 64  NLSAQGLAQQSKDLMLVAWLCEGLAQREHFEGITFGLELTEQLLVAFWETLYPTLED-GL 122

Query: 117 QDPFYRINALALLGDKTSLSGAV-----RQCWLLRYPS----DGISLRDAAAL---CDGS 164
            +   R++ L      T ++G +     +   +LRY      + ++L++  A+    +  
Sbjct: 123 DERAARLSWLKT--TLTDIAGGLPIIQGQNFGVLRYDESRHVENLALQNPKAMQTALNEG 180

Query: 165 KTEVADYPGGLPRLIDELARGDQPGIEAVLQIHERLQTICETI--AERLGEAAVPELIQM 222
           K     +   +     +  R     I   L   +RLQ   + +   E    A++ +++  
Sbjct: 181 KINAEIFQRSVALTDTDYLRAKAQQIATSLNACKRLQASADRLFGHEAPSFASLADMLSR 240

Query: 223 RRQIALIAERCQATDLSQLIPTAAAEQTA-----EAAAPAAVAAAPRAAADWRTVQISSR 277
             Q+A    + +  +L   IP  A  Q       EA  P        A A  RT  + +R
Sbjct: 241 ASQLAEKLLKDRGVELHPAIPEEAQPQAMAANLHEAGEPMNATPPTTAPAALRTTPL-TR 299

Query: 278 ADAQLMLEKVKLYFTQHEPSHPAPLMIDR 306
            +A  ML  +  YF Q EP  P P +I+R
Sbjct: 300 DEAFTMLAGIAQYFKQSEPQSPVPYLIER 328