Pairwise Alignments

Query, 311 a.a., D-ribose ABC transporter substrate-binding protein from Pantoea sp. MT58

Subject, 311 a.a., substrate-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  529 bits (1362), Expect = e-155
 Identities = 274/311 (88%), Positives = 286/311 (91%)

Query: 1   MKKRTLLCTAVAACLVSQAAFAAEKGTIMILVNSLDNPYYASEAKGANLKAQELGYKTTV 60
           MK R++L TA     +S  A AAEKGTIMILVNSLDNPYYASEAKGA+ KAQELGYKTTV
Sbjct: 1   MKLRSMLLTAAITSALSLTAHAAEKGTIMILVNSLDNPYYASEAKGADKKAQELGYKTTV 60

Query: 61  LSHGEDVKKQSELIDAAIGKKVQGIVLDNADSTASVAAIKKAKDAGIPVVLINREIPVDD 120
           LSHGEDVKKQSELIDAAIGKKVQGIVLDNADSTASVAAIKKAK AGIPVVLINREIPVDD
Sbjct: 61  LSHGEDVKKQSELIDAAIGKKVQGIVLDNADSTASVAAIKKAKAAGIPVVLINREIPVDD 120

Query: 121 VALAQITHNNFQAGSDVANVFVEKMGEKGKYAELACNLADNNCVTRSKSFHQVLDQYPDM 180
           VAL QITHNNFQAGSDVANVFV KMGEKGKYAEL C+LADNNCVTRSKSFHQVLDQYP+M
Sbjct: 121 VALVQITHNNFQAGSDVANVFVGKMGEKGKYAELTCSLADNNCVTRSKSFHQVLDQYPEM 180

Query: 181 QSVARQDAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGRNDVIVVGI 240
            SVARQDAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGR+DV+VVGI
Sbjct: 181 TSVARQDAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGRSDVVVVGI 240

Query: 241 DGSNDERDAVKAGTLKATVMLQAQAIAAEGVTDLDNFIQKGVKPEKQRVMFRGILITPEN 300
           DGSNDERDAVK G LKATVMLQAQAIAA+GV DLDN++QKGVKP KQRVMFRGILI   N
Sbjct: 241 DGSNDERDAVKDGALKATVMLQAQAIAAQGVADLDNYLQKGVKPAKQRVMFRGILIQQGN 300

Query: 301 AKNVQDFNYKS 311
           A  VQDFN+KS
Sbjct: 301 ASKVQDFNFKS 311