Pairwise Alignments

Query, 311 a.a., D-ribose ABC transporter substrate-binding protein from Pantoea sp. MT58

Subject, 296 a.a., ribose ABC transporter substrate-binding protein RbsB from Dickeya dianthicola 67-19

 Score =  129 bits (325), Expect = 6e-35
 Identities = 95/285 (33%), Positives = 148/285 (51%), Gaps = 8/285 (2%)

Query: 1   MKKRTLLCTAVAACLVSQAAFAAEKGTIMILVNSLDNPYYASEAKGANLKAQELGYKTTV 60
           +KK   L +AVA    + +A A  K TI ++V++L+NP++ S   GA  +A +LGY   +
Sbjct: 3   LKKIATLVSAVALS-AAVSANALAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVI 61

Query: 61  L-SHGEDVKKQSELIDAAI-GKKVQGIVLDNADSTASVAAIKKAKDAGIPVVLINREIPV 118
           L S     K+ S + D  + G K+  ++++  DS A   A+K A  A IPV+ ++R    
Sbjct: 62  LDSQNNPAKELSNVQDLTVRGTKL--LLINPTDSNAVGNAVKLANQAKIPVITLDRVAAS 119

Query: 119 DDVALAQITHNNFQAGSDVANVFVEKMGEKGKYAELACNLADNNCVTRSKSFHQVLDQYP 178
            +V ++ +  +N   G    +   +K+GE  K  +L      +    R   F +  ++  
Sbjct: 120 GEV-ISHVASDNAFGGKVAGDFIAKKLGEGAKVIQLEGLAGTSAARERGAGFMKSAEKNK 178

Query: 179 DMQSVARQDAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGRNDVIVV 238
               +A Q A      G  +M ++L AHPDVK V   N  +ALGA+ AL+ AGR+DV+VV
Sbjct: 179 -FAMLASQPADFDRTKGLNVMQNLLTAHPDVKAVFAQNDEMALGALRALQTAGRDDVLVV 237

Query: 239 GIDGSNDERDAVKAGTLKATVMLQAQAIAAEGVTDLDNFIQKGVK 283
           G DG+ D   AV+ G L ATV  + + I   GV   D  + KG K
Sbjct: 238 GFDGTADGVKAVEGGKLAATVAQRPEQIGIIGVETADK-VLKGEK 281