Pairwise Alignments

Query, 318 a.a., ABC transporter substrate-binding protein from Pantoea sp. MT58

Subject, 296 a.a., D-ribose transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  123 bits (308), Expect = 6e-33
 Identities = 89/272 (32%), Positives = 136/272 (50%), Gaps = 15/272 (5%)

Query: 7   LTTLVSA-ALTGPVLAADM---TVGFSQVGSESGWRSAETNVAKSEAKKRGITLKIADGQ 62
           L TLVSA AL+  V A  M   T+        + +  +  + A+ EA K G  L + D Q
Sbjct: 6   LATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQ 65

Query: 63  QKQENQIKAVRSFIAQGVDAIFIAPVVQTGWEPVLEEAKDAKIPVYLLDRAIVVKDKSLY 122
                ++  V+    +G   + I P         ++ A  A IPV  LDR      K   
Sbjct: 66  NNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQAT---KGEV 122

Query: 123 QAVVTADNVLEGKLIGDWLVKTVGDKKCNVVELQGTVGASVAIDRKKGFAEAISNHPNIK 182
            + + +DNVL GK+ GD++ K  G+    V+ELQG  G S A +R +GF +A++ H    
Sbjct: 123 VSHIASDNVLGGKIAGDYIAKKAGE-GAKVIELQGIAGTSAARERGEGFQQAVAAH-KFN 180

Query: 183 VIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMAIGAIQAIKEAGLKPGKDI 242
           V+ SQ  DF R KG  VM++ + A     ++  V+A ND+MA+GA++A++ AG     D+
Sbjct: 181 VLASQPADFDRIKGLNVMQNLLTAH---PDVQAVFAQNDEMALGALRALQTAG---KSDV 234

Query: 243 LTGSIDGVPDIYKAMLAGEANANVELTPNMAG 274
           +    DG PD  KA+  G+  A +   P+  G
Sbjct: 235 MVVGFDGTPDGEKAVNDGKLAATIAQLPDQIG 266