Pairwise Alignments

Query, 327 a.a., arabinose ABC transporter substrate-binding protein from Pantoea sp. MT58

Subject, 326 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  375 bits (964), Expect = e-109
 Identities = 195/324 (60%), Positives = 239/324 (73%), Gaps = 2/324 (0%)

Query: 4   FTKAFAAIGLAAVMSQSAIAETMKLGFLVKQPEEPWFQTEWKFADKAGKDLGFDVIKIAV 63
           F K    + LA   S  A+AE +K+GFLVKQ EEPWFQTEW FA+KAGKD GF VIKIAV
Sbjct: 2   FKKTLGTLALAMAFSSVALAEEVKIGFLVKQAEEPWFQTEWAFAEKAGKDQGFTVIKIAV 61

Query: 64  PDGEKTLNAIDSLAANGAKGFVICTPDPKLGSAIMAKARGYGLKVIAVDDQFVTAKGKPM 123
           PDGEKTL+AID+LAANGAKGFVIC PD  LG AIMAKA+   LKV+AVDD+FV AKGKPM
Sbjct: 62  PDGEKTLSAIDTLAANGAKGFVICPPDVSLGPAIMAKAKLNNLKVLAVDDRFVDAKGKPM 121

Query: 124 DTVPLVMMAATKIGERQGQELYKEMQKRGWDVKTTGVMAITANELDTARRRTGGSMDAIK 183
           + VP V + A KIG++QG+ +  E + R WD K T  +  T +EL+T ++RT GS++ +K
Sbjct: 122 EDVPYVGLDAYKIGQKQGEAMATEAKHRNWDWKDTYAVINTFDELETGKKRTDGSVEGLK 181

Query: 184 AAGFPAAQIYQVPTKSNDIPGAFDAGNSLLVQHPE-VKHWLIVGMNDNTVLGGVRATEGQ 242
           AAG PA  I     K+ D+PG+ DA NS LV+ P   K+ +I GMND+TVLGGVRATE  
Sbjct: 182 AAGLPADHILFSAQKTLDVPGSMDATNSALVKLPSGAKNLIIGGMNDSTVLGGVRATESA 241

Query: 243 GFKAADVIGIGINGVDAISELSKDKATGFYGSLLPSPDIHGYKSSQMLYNWVSKGEEPPK 302
           GFKAA+VIG+GING DAI EL K   TGFYGS+L SPD  GYK++  ++ WV++G EP K
Sbjct: 242 GFKAANVIGVGINGTDAIEELKKSD-TGFYGSMLLSPDASGYKTASAMFEWVTQGTEPAK 300

Query: 303 FTEVTDVVLITRDNFKTELAKKGL 326
           FT + +V LITR NFK EL+K GL
Sbjct: 301 FTALDNVTLITRANFKEELSKIGL 324