Pairwise Alignments

Query, 327 a.a., L-arabinose ABC transporter permease AraH from Pantoea sp. MT58

Subject, 343 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

 Score =  192 bits (489), Expect = 8e-54
 Identities = 117/340 (34%), Positives = 186/340 (54%), Gaps = 15/340 (4%)

Query: 1   MASSTTSNTPQPA-SRGGLQLGRIWDNFGMLVVFALLFIVCAIFVPNFGSFINMKGLGLA 59
           M+    S +  P+ SRG       ++ FG+ +   LL I       NF S  N+  +   
Sbjct: 1   MSQQPLSKSITPSNSRGRFDPIAFFERFGVFIFMILLLIFFQSQNSNFLSERNITNILTE 60

Query: 60  MSMSGMVACGMLFCLASGDFDLSVASVIACAGVVTAVVIN------MTESLWIGV----- 108
           +S+ G++A GM F + +   DLSV S++A   +  A VI       +    W G+     
Sbjct: 61  VSIYGIMAVGMTFVILTAGIDLSVGSILAVCAITAASVIKGDNFTTVDPDAWYGLSWLVA 120

Query: 109 -GAGLVLGMITGFINGFVIARLKINALITTLATMQIVRGLAYIFSDGKAVGIEDERFFEL 167
            G  L +G   GF++G  + +L++   I TL  M I RGL  + +DG  +   D  +   
Sbjct: 121 LGVCLAMGTFIGFLHGLGVTKLRLPPFIVTLGGMTIWRGLTLVMNDGAPIAGFDPGYRWW 180

Query: 168 GFANWLGVPAPIWLTLATMVIFGFL-LNKTTFGRNTLAIGGNEEAARLAGVPVVRTRIII 226
           G    LG+  PIW+  A + + G+L L+KT +GR   AIGGN EAARLAGV V R  + +
Sbjct: 181 GRGEILGISVPIWI-FALVALLGYLALHKTRWGRFVYAIGGNTEAARLAGVNVQRVLVSV 239

Query: 227 FILSGLVSAAAGIILASRMTSGQPMTSIGYELVVISACVLGGVSLKGGIGKISYVVAGVL 286
           +++ G ++  AG IL++R+ S + +  I +EL VI++ V+GG SL GG G+IS  + G +
Sbjct: 240 YVVIGCLAGLAGFILSARLGSAEAVAGITFELRVIASVVIGGTSLMGGYGRISGTIIGSI 299

Query: 287 ILGTVENAMNLLNISPFSQYVVRGLILLAAVIFDRYKQKK 326
           I+G + N + L+N+S + Q ++ GLI++ AV FD Y + +
Sbjct: 300 IMGILINGLVLMNVSAYYQQIITGLIIVLAVAFDTYAKSR 339