Pairwise Alignments

Query, 238 a.a., ABC transporter permease from Pantoea sp. MT58

Subject, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

 Score =  145 bits (365), Expect = 8e-40
 Identities = 89/200 (44%), Positives = 122/200 (61%), Gaps = 7/200 (3%)

Query: 40  LLYLGQQHLFLVFWSMLFALLVGIPSGILLSRPFARRWAEYVMQIFNVGNTLPPLAVLAL 99
           +L L  QH+ LV  +++ A+L+G+P GIL++R      A  +     V  T+P +A+  L
Sbjct: 15  VLQLTGQHITLVGIAVILAILIGVPLGILMTR--FPTLAGPLQASATVLLTVPSIALFGL 72

Query: 100 AMVII-----GIGDRPALIALFLASLLPIVRNTFSGLSAVPPSLIEAANGIGMTKWQRLR 154
            +        G+G  PA+ A+FL SLLPI+RNT+  L+ V P + EAA GIGMT  QRLR
Sbjct: 73  LLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRLR 132

Query: 155 QVELPNALPVILAGVRIATAINVGTAPLAFLIGASSFGELIFPGIYLNDFPTLILGAVAT 214
            VELP A+PVILAGVR A  +N+G   +A  IGA   G LI   I  +D   LI+GAV  
Sbjct: 133 MVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVLV 192

Query: 215 ALVALVLDMLLAALGRFLSP 234
           +L+A+  D+LL  L R L+P
Sbjct: 193 SLLAIFADLLLQWLQRSLTP 212