Pairwise Alignments

Query, 159 a.a., type VI secretion system tube protein Hcp from Pantoea sp. MT58

Subject, 163 a.a., type VI secretion system effector Hcp from Pantoea sp. MT58

 Score =  146 bits (369), Expect = 1e-40
 Identities = 73/163 (44%), Positives = 100/163 (61%), Gaps = 4/163 (2%)

Query: 1   MSVPAHLWLDDENGSPIVGSCQMPLRLGSIELKSFAHHITIPVDPAWGKLTCTRFHSPIT 60
           M++P +LWL D+ G+ I GS  +  R GSIE+ +  H++ IP D   GKLT TR H+P  
Sbjct: 1   MAIPVYLWLKDDGGADIKGSVDVQDREGSIEVVAQEHNLYIPTDNNTGKLTGTRIHTPFL 60

Query: 61  IVKEFDQTTSVLYRAICEGRILKNGTTKMYRIVESGSEVEYFNIMLEGIKLTTVSPYL-- 118
             KE D  +  LY+A+  G+ LK+   + YRI ++G EVEYFN  LE +K+  V+P +  
Sbjct: 61  FTKEIDSASPYLYKAVTTGQTLKSAEFRWYRINDAGQEVEYFNTKLENVKVVKVNPEMYD 120

Query: 119 --APNGLSSTHLETLELRYQAITWKYTDGNIIYGDEWNNFAKA 159
              P+     HLE +ELRY+ ITW Y DGNII+ D WN  A A
Sbjct: 121 VKDPSYEKHNHLERIELRYEKITWTYKDGNIIHSDSWNERATA 163