Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Pantoea sp. MT58

Subject, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

 Score =  199 bits (505), Expect = 4e-56
 Identities = 103/205 (50%), Positives = 140/205 (68%), Gaps = 3/205 (1%)

Query: 1   MIGRLRGNILEKQPPLVLLEAHGVGYEIYMPMTCFYELPELQHEAVIFTHFVVREDAQLL 60
           MIGRLRG + EKQPP ++L+ +G+GYE+ +PMT  Y LP +     + TH VVREDAQLL
Sbjct: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60

Query: 61  FGFNSKQERALFRELIKVNGVGPKLALAILSGMSAQQFVTAVEKEEIASLVKLPGVGKKT 120
           +GF  K++R  FRELI++NGVGPKLALA++S +   + V AV  ++ ++L K+PGVGKKT
Sbjct: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120

Query: 121 AERLVVEMKDRFKGMHGDLFGGDSAFTLTTPS-AEPETNDAESEAVAALVSLGYKPQEAS 179
           AERL+VE+KDRFK    ++     A     P     +   AES+AV AL+SLGYKPQEAS
Sbjct: 121 AERLLVELKDRFKAW--EVVPSMFALVPNQPDMPAAQVASAESDAVNALISLGYKPQEAS 178

Query: 180 RMISKVGRPDADCETLIREALRAAI 204
           + +S +   +   E +IR AL+  I
Sbjct: 179 KAVSAIKDKNLSAEDMIRRALKGMI 203