Pairwise Alignments

Query, 382 a.a., flagellar type III secretion system protein FlhB from Pantoea sp. MT58

Subject, 380 a.a., flagellin export apparatus, substrate specificity protein from Pseudomonas putida KT2440

 Score =  276 bits (706), Expect = 7e-79
 Identities = 155/373 (41%), Positives = 233/373 (62%), Gaps = 2/373 (0%)

Query: 2   SDSDEDKTESPTAHRLEKAREEGQIPRSRELTSVLMLLAGIMILWMGGNMMAHRLAAMVA 61
           S+S +DKTE PT  R   ARE+G++ RS+EL +V + LAG   L   G  +A  L A++ 
Sbjct: 4   SESGQDKTEDPTEKRKRDAREKGEVARSKELNTVAVTLAGAGGLLAFGGHVAETLLALMR 63

Query: 62  TGLRFDHGMVRDDKIIVSHIGSLITQALMALLPLMGGLVLVAIAAPMLLGGIVFSGKSIK 121
                   ++ D++ + + + +    A+ A+ P++  L +V+  AP+ L G +FSG  ++
Sbjct: 64  MNFSLTRDIIVDERAMGAFLLASGKMAIWAVQPVLILLFVVSFVAPIALSGFLFSGSLLQ 123

Query: 122 FDPKKMNPIAGFKRMFAAQAWTELFKGILKTILVGAVGWWYIWSHWPEMLRLISEAPVTA 181
               +MNP++G KRMF+ QA TEL K + K  ++  V    +      +L + +E    A
Sbjct: 124 PKFSRMNPLSGIKRMFSMQALTELLKALAKFFVILVVAVVVLSGDRQALLSIANEPLEQA 183

Query: 182 LIHGMEMIAVCCSLVMLGLIPMVGYDVFWQLYSHFKKLKMSMQEIRDEHKQQEGDPHVKG 241
           +IH ++++      +  GL+ +   DV +QLY   KK+KM+ QE+RDE+K  EG P VK 
Sbjct: 184 IIHSLQVVGWSALWMSAGLLLIAAADVPFQLYQTHKKMKMTKQEVRDEYKDSEGKPEVKQ 243

Query: 242 RIRQQMRAAARRRMMADVPKADVIVTNPTHYSVALQYN-EKKMSAPKVVAKGAGEIALRI 300
           RIRQ  R  ++RRMMA VP ADVI+TNPTHY+VALQY+ EK  +AP ++AKG+  +AL+I
Sbjct: 244 RIRQLQREVSQRRMMAAVPDADVIITNPTHYAVALQYDPEKGGAAPLLLAKGSDFMALKI 303

Query: 301 RELAAEHRIPVLEAPPLARALYRHTEIGQHIPGALYAAVAEVLAWVWQSRRWKREGGLIP 360
           RE+  EH I +LE+P LARA+Y  TE+ Q IP  LY AVA+VLA+V+Q R+++   G  P
Sbjct: 304 REIGVEHNIQILESPALARAIYYSTELEQEIPAGLYLAVAQVLAYVFQIRQYRAGKGKRP 363

Query: 361 TKPK-DLPVPAEM 372
              K DLP+P ++
Sbjct: 364 EPLKDDLPIPPDL 376