Pairwise Alignments

Query, 135 a.a., flagellar motor switch protein FliN from Pantoea sp. MT58

Subject, 155 a.a., flagellar motor switch protein from Pseudomonas simiae WCS417

 Score =  115 bits (288), Expect = 3e-31
 Identities = 65/148 (43%), Positives = 99/148 (66%), Gaps = 19/148 (12%)

Query: 5   NKPSDDISADDLWAEAMNE--QVG-----------SSSAPQTD----DVFKSFDSANVAG 47
           N  ++D +  D WA A+ E   VG           +++AP  +    + F S    N   
Sbjct: 7   NTSAEDQALADEWAAALEETGDVGQDDIDALLAADAATAPAGNRLPMEEFGSVPKNNEPV 66

Query: 48  SLQ--DIDLIMDIPVKLTVELGRTKMTIKELLRLTQGSVVSLDGLAGEPLDILINGYLIA 105
           +L   ++D+I+DIPV +++E+G T++ I+ LL+L QGSV+ LD LAGEPLD+L+NG LIA
Sbjct: 67  TLDGPNLDVILDIPVSISMEVGSTEINIRNLLQLNQGSVIELDRLAGEPLDVLVNGTLIA 126

Query: 106 QGEVVVVNDKYGVRITDIITPSERMRRL 133
            GEVVVVN+K+G+R+TD+I+PSER+++L
Sbjct: 127 HGEVVVVNEKFGIRLTDVISPSERIKKL 154