Pairwise Alignments

Query, 89 a.a., flagellar biosynthesis protein FliQ from Pantoea sp. MT58

Subject, 90 a.a., Type III secretion inner membrane protein (YscS,homologous to flagellar export components) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 56.2 bits (134), Expect = 8e-14
 Identities = 26/76 (34%), Positives = 49/76 (64%)

Query: 12 EAMRVALMLAAPLLLAALVSGLLISLIQAATQVNEQTLSFIPKILAVATTGIIAGPWMLN 71
          + + ++L+L+ P++ AA + G L+++IQA TQ+ EQTL +  K++A A    +   W+ +
Sbjct: 13 KGLYLSLVLSMPMVAAAAIVGTLMAVIQALTQIQEQTLGYAVKLIATAVALTLTLNWIGS 72

Query: 72 LLLDYIRTVFTNLPYI 87
           +L Y R +F  +P+I
Sbjct: 73 EILQYTRQLFDLIPFI 88