Pairwise Alignments

Query, 638 a.a., HAMP domain-containing protein from Pantoea sp. MT58

Subject, 555 a.a., methyl-accepting chemotaxis protein from Pectobacterium carotovorum WPP14

 Score =  329 bits (843), Expect = 2e-94
 Identities = 196/359 (54%), Positives = 250/359 (69%), Gaps = 15/359 (4%)

Query: 292 ITLSLLIAWRMTRSITV----PLRETLSSAQRIAEGDLTAEITSSRTDELGELMTAMGAM 347
           + + L++ +   R + V    PL +       IA G L   I     + +G L   +  M
Sbjct: 200 LVIGLIMLFLTDRYLVVCLVRPLNDLRYHFSVIASGHLGKPILDFGNNCVGRLFPLLREM 259

Query: 348 NQSLRNIISRVRDGVNNVARASSEIAAGNTDLSSRTEQQSAAVVETAASMEELTSTVKLN 407
             SL + +S +R+  +++ + +SEIAAGN DLSSRTE+Q++A+ ETAASME+LT+TVK N
Sbjct: 260 QGSLASTVSTIRNSTDSIYQGASEIAAGNNDLSSRTEEQASALEETAASMEQLTATVKQN 319

Query: 408 AENAHHASQLATDASHNASCGGEIISEVITTMGGISQSSGKIGEIITVINGIAFQTNILA 467
           AENA+HASQLA  AS  A  GGEI+  V+ TM  IS SS KI EI TVINGIAFQTNILA
Sbjct: 320 AENANHASQLALQASTTAKKGGEIVENVVKTMAEISGSSRKIAEITTVINGIAFQTNILA 379

Query: 468 LNAAVEAARAGEQGRGFAVVAGEVRNLAQRSSLAAKEIEVLIRESLDRVSNGTELVNRAG 527
           LNAAVEAARAGEQGRGFAVVAGEVR+LAQRS+ AAKEIE LI ES+  V  G+ LV+ AG
Sbjct: 380 LNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAQAAKEIEGLISESVRCVDTGSNLVSDAG 439

Query: 528 VTMEGIVRSVTQVRDIMGEIAAASDEQNRGITQIAQAMTEMDSTTQQNAALVEESSAAAS 587
            TM+ IVR+VT V DIMGEIA+AS+EQ++GI Q+ QA+ EMDS TQQNAALVE++S+AA 
Sbjct: 440 DTMQDIVRAVTNVTDIMGEIASASEEQSKGIAQVGQAVAEMDSVTQQNAALVEQASSAAL 499

Query: 588 SLEEQALELEKTVSVFRVPSSGAFTPRAQTTRRNVQ--PSVSLMASKA------NWETF 638
           SLEEQA  L +TVS+F++  + +     Q   + VQ  P+++  A KA      NWE F
Sbjct: 500 SLEEQAALLNQTVSLFQLSDTQS---GLQVAAKPVQKTPAIAPRAGKALPPSNDNWEKF 555