Pairwise Alignments

Query, 638 a.a., HAMP domain-containing protein from Pantoea sp. MT58

Subject, 510 a.a., methyl-accepting chemotaxis protein from Pectobacterium carotovorum WPP14

 Score =  376 bits (966), Expect = e-108
 Identities = 205/368 (55%), Positives = 269/368 (73%)

Query: 238 LQSVQVEKRASDEMTAAAGKLNQSITDLAFFQSEQAQKYMHTALWQIGFATLVCITLSLL 297
           + S  V ++   E+ A    L ++I  L F +  +A + + ++  Q+G  TL+ I L L 
Sbjct: 128 VMSPDVSQQRLSELNAQMAVLQENINKLYFTEETRAGRNVISSDIQLGVITLIAIILGLT 187

Query: 298 IAWRMTRSITVPLRETLSSAQRIAEGDLTAEITSSRTDELGELMTAMGAMNQSLRNIISR 357
            A  ++R I  PL + L + + IAEGDLT ++ + R DELG+L++AMG MN +L ++I +
Sbjct: 188 TAIVISRQIVRPLHQALHATRAIAEGDLTVQLHNDRHDELGQLISAMGQMNSNLHSMIDK 247

Query: 358 VRDGVNNVARASSEIAAGNTDLSSRTEQQSAAVVETAASMEELTSTVKLNAENAHHASQL 417
           +R   N ++ A+ EI+AGNTDLSSRT QQ+AA+ ETAASME+LTSTVK NA+NAH A++L
Sbjct: 248 IRLSANQISYAAGEISAGNTDLSSRTTQQAAALEETAASMEQLTSTVKQNADNAHQANRL 307

Query: 418 ATDASHNASCGGEIISEVITTMGGISQSSGKIGEIITVINGIAFQTNILALNAAVEAARA 477
             DAS  A+ GGE +S+ + TM  I+QSS +I EI ++IN IAFQTNILALNAAVEAARA
Sbjct: 308 VMDASDTANQGGEQVSKAVNTMHDIAQSSHRIAEITSMINSIAFQTNILALNAAVEAARA 367

Query: 478 GEQGRGFAVVAGEVRNLAQRSSLAAKEIEVLIRESLDRVSNGTELVNRAGVTMEGIVRSV 537
           GEQGRGFAVVA EVRNLAQRS+ AAKEI+ LI ES+ +++NG  LVN AG TMEGIV SV
Sbjct: 368 GEQGRGFAVVASEVRNLAQRSAQAAKEIDTLIGESVSQINNGAALVNGAGKTMEGIVHSV 427

Query: 538 TQVRDIMGEIAAASDEQNRGITQIAQAMTEMDSTTQQNAALVEESSAAASSLEEQALELE 597
           TQV  IM +I  ASDEQ+RGI+Q+ QA+ EMD  TQQN  LVE+SS+AA SLE+QA+ L 
Sbjct: 428 TQVHAIMKDITTASDEQHRGISQVGQAIIEMDQNTQQNTVLVEQSSSAAQSLEQQAIVLS 487

Query: 598 KTVSVFRV 605
             VSVFR+
Sbjct: 488 DAVSVFRL 495



 Score = 52.0 bits (123), Expect = 6e-11
 Identities = 85/464 (18%), Positives = 192/464 (41%), Gaps = 59/464 (12%)

Query: 10  LNIGRKLTLGFLLVILASLAISVLAALCFLKIQDNSEKRDVTVQMVDALAKARLNRTLFQ 69
           L++ RKL +GF L+++  + +S++          + ++      M D    AR     + 
Sbjct: 10  LSVTRKLLVGFGLLLIMGVILSMVGFYGLYNSDQSLKRISRLGAMYDKTVVAREGNFGYA 69

Query: 70  YTRDTKFIELNGEAMN----QLSALYKNLEKYSWSTGGREKLSALNTALAQYQEKRQHFL 125
             R  +++E +  A+     +LS L K ++   W T  +  +  ++ +L  Y  +RQ  +
Sbjct: 70  LERKAQYLEQHDSAIGNISEELSTLLKAIDTGDWPTEDKSTIQDISASLNAYITQRQQVM 129

Query: 126 AS----------NHSAALSLNDIQALGLTSVAEKLAARQAYVPAD-----LTAPLLALSL 170
           +           N   A+   +I  L  T   E+  A +  + +D     +T   + L L
Sbjct: 130 SPDVSQQRLSELNAQMAVLQENINKLYFT---EETRAGRNVISSDIQLGVITLIAIILGL 186

Query: 171 KTEQAAFYVQAFMHGPDASTLNKFNEIKDGFSPLVSQLSGLADTSLGALLADVAQKTTSG 230
            T   A  +   +  P    L+    I +G   L  QL       LG L++ + Q  ++ 
Sbjct: 187 TT---AIVISRQIVRPLHQALHATRAIAEG--DLTVQLHNDRHDELGQLISAMGQMNSN- 240

Query: 231 TTLLNNYLQSVQVEKRASDEMTAAAGKLNQSITDLAFFQSEQAQKYMHTALWQIGFATLV 290
              L++ +  +++   ++++++ AAG+++   TDL+   ++QA     TA          
Sbjct: 241 ---LHSMIDKIRL---SANQISYAAGEISAGNTDLSSRTTQQAAALEETA---------- 284

Query: 291 CITLSLLIAWRMTRSITVPLRETLSSAQRIAEGDLTAEITSSR-TDELGELMTAMGAMNQ 349
                          +T  +++   +A +     + A  T+++  +++ + +  M  + Q
Sbjct: 285 ----------ASMEQLTSTVKQNADNAHQANRLVMDASDTANQGGEQVSKAVNTMHDIAQ 334

Query: 350 SLRNIISRVRDGVNNVARASSEIAAGNTDLSSRTEQQSAAVVETAASMEELTSTVKLNAE 409
           S    I+ +   +N++A  ++ +A      ++R  +Q       A+   E+ +  + +A+
Sbjct: 335 SSHR-IAEITSMINSIAFQTNILALNAAVEAARAGEQGRGFAVVAS---EVRNLAQRSAQ 390

Query: 410 NAHHASQLATDASHNASCGGEIISEVITTMGGISQSSGKIGEII 453
            A     L  ++    + G  +++    TM GI  S  ++  I+
Sbjct: 391 AAKEIDTLIGESVSQINNGAALVNGAGKTMEGIVHSVTQVHAIM 434