Pairwise Alignments

Query, 638 a.a., HAMP domain-containing protein from Pantoea sp. MT58

Subject, 567 a.a., methyl-accepting chemotaxis protein from Pectobacterium carotovorum WPP14

 Score =  344 bits (882), Expect = 7e-99
 Identities = 208/409 (50%), Positives = 272/409 (66%), Gaps = 23/409 (5%)

Query: 240 SVQVEKRASDEMTAAAGKLNQSITDLAFFQSEQAQKYMHTALWQIGFATLVCITLSLLIA 299
           SV V K+ + E+T AA  +N    D A               W +  +  + I ++++  
Sbjct: 172 SVPVRKKVN-ELTQAAQDINHRAADNA-----------KLGYWMMAGSFALSIIMAIMAY 219

Query: 300 WRMTRSITVPLRETLSSAQRIAEGDLTAEITSSRTDELGELMTAMGAMNQSLRNIISRVR 359
             +   I  P+   +   Q+IA GDLT    +   +E+G L T +  M   L + ++ VR
Sbjct: 220 IIVRNVILAPINRLVDRIQKIAAGDLTQPPMAMGRNEIGILGTNIQNMQAELTDTVTIVR 279

Query: 360 DGVNNVARASSEIAAGNTDLSSRTEQQSAAVVETAASMEELTSTVKLNAENAHHASQLAT 419
           +G +++ + SSEI AGN DLSSRTEQQ+AA+ ETAASME+LT+TVK N++NAHHASQLA 
Sbjct: 280 EGADSIYQGSSEITAGNVDLSSRTEQQAAALEETAASMEQLTATVKQNSDNAHHASQLAK 339

Query: 420 DASHNASCGGEIISEVITTMGGISQSSGKIGEIITVINGIAFQTNILALNAAVEAARAGE 479
           +AS  A  GG+I+  V+ TM  IS SS +I EI +VIN IAFQTNILALNAAVEAARAGE
Sbjct: 340 NASEKAEKGGQIVKNVVDTMQDISTSSRRISEITSVINSIAFQTNILALNAAVEAARAGE 399

Query: 480 QGRGFAVVAGEVRNLAQRSSLAAKEIEVLIRESLDRVSNGTELVNRAGVTMEGIVRSVTQ 539
           QGRGFAVVAGEVR+LAQRS+ AAKEIE LI ES   V  G+ LV++AG TM  IVR+V  
Sbjct: 400 QGRGFAVVAGEVRSLAQRSAQAAKEIEGLIGESSRLVDTGSGLVSQAGTTMGEIVRAVVS 459

Query: 540 VRDIMGEIAAASDEQNRGITQIAQAMTEMDSTTQQNAALVEESSAAASSLEEQALELEKT 599
           V DIMGEIA+ASDEQ+RGI Q++QA++EMDS TQQNAALV+E+SAAA SLEEQA  L + 
Sbjct: 460 VTDIMGEIASASDEQSRGIGQVSQAVSEMDSATQQNAALVQEASAAAVSLEEQAARLTQA 519

Query: 600 VSVFRVPSSG----AFTPRAQTTRRNVQPSVSLMASKA------NWETF 638
           VSVF++        +  P+A    R + P+++L  + +      NWETF
Sbjct: 520 VSVFKLAGVAQRMKSSLPKAAPQPR-LAPAMALAGASSKGSDSQNWETF 567