Pairwise Alignments

Query, 638 a.a., HAMP domain-containing protein from Pantoea sp. MT58

Subject, 547 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  348 bits (892), Expect = e-100
 Identities = 193/394 (48%), Positives = 264/394 (67%), Gaps = 2/394 (0%)

Query: 245 KRASDEMTAAAGKLNQSITDLAFFQSEQAQKYMHTALWQIGFATLVCITLSLLIAWRMTR 304
           ++A D+M     +       L    S+Q Q       W +G   L+ + +   I   + R
Sbjct: 156 QKAQDDMEQVYDQWLSQNAQLIKLASDQNQSSFTQMQWTLGIILLIVLIVLAFIWLGLQR 215

Query: 305 SITVPLRETLSSAQRIAEGDLTAEITSSRTDELGELMTAMGAMNQSLRNIISRVRDGVNN 364
            +  PL+  ++  Q IA+GDLT EI +    E+G+L   +  M QSL   +S VRD  ++
Sbjct: 216 VLLRPLQRIMAHIQTIADGDLTHEIEAEGRSEMGQLAAGLKTMQQSLIRTVSAVRDNADS 275

Query: 365 VARASSEIAAGNTDLSSRTEQQSAAVVETAASMEELTSTVKLNAENAHHASQLATDASHN 424
           +   + EI+AG++DLSSRTEQQ++A+ ETAASME+LT+TV+ N +NA  A+ LA  AS  
Sbjct: 276 IYTGAGEISAGSSDLSSRTEQQASALEETAASMEQLTATVRQNTDNARQATGLAKTASET 335

Query: 425 ASCGGEIISEVITTMGGISQSSGKIGEIITVINGIAFQTNILALNAAVEAARAGEQGRGF 484
           A  GG ++  V++TM  I++SS KI +I +VI+GIAFQTNILALNAAVEAARAGEQGRGF
Sbjct: 336 ARKGGRVVDNVVSTMNDIAESSEKIVDITSVIDGIAFQTNILALNAAVEAARAGEQGRGF 395

Query: 485 AVVAGEVRNLAQRSSLAAKEIEVLIRESLDRVSNGTELVNRAGVTMEGIVRSVTQVRDIM 544
           AVVAGEVR LA RS+ AAKEI+VLI  S+ R+  G+  V  AG TM+ IV +VT+V DIM
Sbjct: 396 AVVAGEVRTLASRSAQAAKEIKVLIENSVSRIDTGSTQVREAGETMKEIVNAVTRVTDIM 455

Query: 545 GEIAAASDEQNRGITQIAQAMTEMDSTTQQNAALVEESSAAASSLEEQALELEKTVSVFR 604
           GEIA+ASDEQ++GI Q+AQA++EMDS TQQNA+LVEES+AAA++LE+QA EL + V+ FR
Sbjct: 456 GEIASASDEQSKGIEQVAQAVSEMDSVTQQNASLVEESAAAAAALEDQANELRQAVAAFR 515

Query: 605 VPSSGAFTPRAQTTRRNVQPSVSLMASKANWETF 638
           +           T  + + P  +  A +ANWE+F
Sbjct: 516 IQKQPRREASPTTLSKGLTPQPA--AEQANWESF 547



 Score = 32.0 bits (71), Expect = 7e-05
 Identities = 54/282 (19%), Positives = 111/282 (39%), Gaps = 26/282 (9%)

Query: 221 ADVAQKTTSGTTLLNNYLQSVQVEKRASDEMTAAAGKLNQSITDLAFFQSEQAQKYMHTA 280
           +++ Q      T+  + +++V   +  +D +   AG+++   +DL+    +QA     TA
Sbjct: 246 SEMGQLAAGLKTMQQSLIRTVSAVRDNADSIYTGAGEISAGSSDLSSRTEQQASALEETA 305

Query: 281 LWQIGF-------------ATLVCITLSLLI--AWRMTRSITVPLRETLSSAQRIAEGDL 325
                              AT +  T S       R+  ++   + +   S+++I +   
Sbjct: 306 ASMEQLTATVRQNTDNARQATGLAKTASETARKGGRVVDNVVSTMNDIAESSEKIVDITS 365

Query: 326 TAEITSSRTDELGELMTAM-----GAMNQSLRNIISRVRDGVNNVARASSEIAAGNTDLS 380
             +  + +T+ L  L  A+     G   +    +   VR   +  A+A+ EI     +  
Sbjct: 366 VIDGIAFQTNILA-LNAAVEAARAGEQGRGFAVVAGEVRTLASRSAQAAKEIKVLIENSV 424

Query: 381 SRTEQQSAAVVETAASMEELTSTVKLNAENAHHASQLATDASHNASCGGEIISEVITTMG 440
           SR +  S  V E   +M+E+ + V    +     +     AS   S G E +++ ++ M 
Sbjct: 425 SRIDTGSTQVREAGETMKEIVNAVTRVTDIMGEIA----SASDEQSKGIEQVAQAVSEMD 480

Query: 441 GISQSSGKIGEIITVINGIAFQTNILALNAAVEAARAGEQGR 482
            ++Q +  + E  +     A +     L  AV A R  +Q R
Sbjct: 481 SVTQQNASLVE-ESAAAAAALEDQANELRQAVAAFRIQKQPR 521