Pairwise Alignments

Query, 307 a.a., sugar ABC transporter substrate-binding protein from Pantoea sp. MT58

Subject, 291 a.a., ribose ABC transporter substrate-binding protein RbsB from Pantoea sp. MT58

 Score =  146 bits (368), Expect = 6e-40
 Identities = 94/295 (31%), Positives = 164/295 (55%), Gaps = 9/295 (3%)

Query: 4   KKTIVASLLACMLPAAAMAKDISVGVSMALFDDNFLTILRTSMQKEMQKDGVKGQVEDAK 63
           K T +A +L   L  +AMAKD ++ + ++  ++ F   L+   QKE  K G    V D++
Sbjct: 3   KLTALAMILGATLSTSAMAKD-TIALVVSTLNNPFFVSLKEGAQKEADKLGYNLVVLDSQ 61

Query: 64  GDVSQQLQQVQNFIGQGVDALIVNPVDTNAVKPIMDQASKAGIPLIFVNRRPGAELTGKM 123
            + +++L  VQ+   +G   L++NP D++AV   +  A++A IP+I ++R         +
Sbjct: 62  NNPAKELANVQDLTVRGTKLLLINPTDSDAVGNAVKMANQAKIPVITLDRVAAQGTV--V 119

Query: 124 AYVGSDSELAGRLQMEALAKAMNGKGNVAILMGDLANEATRDRTKGVEEVAAKFPGIKIV 183
           ++V SD+   G++  + +AK +     +  L G     A R+R +G ++ AA     +I+
Sbjct: 120 SHVASDNRFGGKMAGDFIAKKVGENAKIIELQGIAGTSAARERGEGFKQ-AADAHKFQIL 178

Query: 184 QKQTAKFTRNDAVDVVSNWMTAGDQINAIASNNDEMAIGALQAL---GKNPDKILIAGVD 240
             Q A F R   ++V+ N + A   + A+ + NDEMA+GAL+AL   GK    +++ G D
Sbjct: 179 ASQPADFDRTKGLNVMQNLLQAHPDVQAVFAQNDEMALGALRALQTAGKTG--VIVVGFD 236

Query: 241 GTPDALQMLKQGKMVATVFQDAQGQGEGAVQTAIKLVKGEKVQKIINIPYQLITK 295
           GT D ++ ++ GK+ ATV Q  +  G   V TA K++KGEKVQ +  +  +L+T+
Sbjct: 237 GTADGVKAVEAGKLSATVAQMPEKIGMIGVDTADKVLKGEKVQAVNPVDLKLVTQ 291