Pairwise Alignments

Query, 460 a.a., tRNA 5-hydroxyuridine modification protein YegQ from Pantoea sp. MT58

Subject, 653 a.a., putative peptidase from Escherichia coli BL21

 Score =  134 bits (337), Expect = 9e-36
 Identities = 120/458 (26%), Positives = 196/458 (42%), Gaps = 88/458 (19%)

Query: 5   ELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFTHENLALGINEAHALGKKFYV 64
           ELLSPA      R A  +GADAVY G P +  R  N   + +++A  +  AH  G K +V
Sbjct: 9   ELLSPARDAAIAREAILHGADAVYIGGPGFGAR-HNASNSLKDIAELVPFAHRYGAKIFV 67

Query: 65  VVNIAPHNAKLKTFIRDLAPVVEMQPDALIMSDPGLIMLVREAFPTMPIHLSVQANAVNW 124
            +N   H+ +L+   R +  + +   DALI+ D G++ L     P + +H S Q +    
Sbjct: 68  TLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILEL---DIPPIELHASTQCDIRTV 124

Query: 125 ATVKFWQQMGLSRVILSRELSLEEIGEIRQQVPEMELEVFVHGALCMAYSGRCLLSGYMN 184
              KF   +G ++++L+REL+L++I  I Q   +  +E F+HGALC+AYSG+C +S    
Sbjct: 125 EKAKFLSDVGFTQIVLARELNLDQIRAIHQAT-DATIEFFIHGALCVAYSGQCYISHAQT 183

Query: 185 KRDPNQGTCTNACRWEYKVQEGQQDEVGNIVGIHTPVAVQDVTPVLGIGQPTDKVFLLEE 244
            R  N+G C+ ACR  Y +    +D+ G +V                             
Sbjct: 184 GRSANRGDCSQACRLPYTL----KDDQGRVV----------------------------- 210

Query: 245 KMKPGDVMSAFEDEHGTYIMNSRDLRAVAHVERLSEMGVHSLKIEGRTKSYYYCARTAQV 304
                         +  ++++ +D    A++  L + GV S KIEGR K   Y       
Sbjct: 211 -------------SYEKHLLSMKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAH 257

Query: 305 YRRAID----------DAAAGKPFDPSLLLTLEGLAHRGYTEGFLRRHTHDSYQNYQQGF 354
           YR+ +D           A++G+  +   + + E   HRG T+ F+     D         
Sbjct: 258 YRQMLDAIIEERGDLARASSGRT-EHFFVPSTEKTFHRGSTDYFVNARKGD--------I 308

Query: 355 SVSDRQQFVGEFTGE---RRGEWAEVAVKNKFMLHDSVEIMTPEGNLNCQLDALQNA--- 408
              D  +F+G   GE      +  +VAV       D + ++     +  + + ++     
Sbjct: 309 GAFDSPKFIGLPVGEVLKVAKDHLDVAVTEPLANGDGLNVLIKREVVGFRANTVEKTGEN 368

Query: 409 --RGEPTEVAPGDGHRVWLQVPQEVDLRFALLLRNFDH 444
             R  P E+ P D H++    P         L RN DH
Sbjct: 369 QYRVWPNEM-PADLHKIRPHHP---------LNRNLDH 396