Pairwise Alignments

Query, 389 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Pantoea sp. MT58

Subject, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  148 bits (374), Expect = 3e-40
 Identities = 112/408 (27%), Positives = 203/408 (49%), Gaps = 53/408 (12%)

Query: 30  IFLIWAHFAILDEVTVGTGKVTPSSRAQVIDSLDGGIVKQLNVHEGDIVEKGQVLATLDP 89
           IF  WA FA L     GTG VT  +  + +  L+GGIVK+L+  +GD+V+KG  L  LD 
Sbjct: 37  IFGTWAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIVKELHARDGDLVKKGDPLIVLDE 96

Query: 90  TRFQSNFGEAQAKVRTLRASSERLEAELSG-----TPLKFSAETLKEPNLVTRERQLYES 144
           ++  + +   + ++   R    RL AE  G     + +    ++ +    +  E+Q++++
Sbjct: 97  SQLSAEYESTRNQLIVARYKEARLRAERDGLDSIPSVIMEGTDSDRAQEALAGEQQVFKA 156

Query: 145 RRRNLT-------ETISNLQQSLKLVQDELRLTEPLVAKGAAGQVEVIR----------- 186
           R  +L        E I  +QQ +  + D +R T+  + K  +G+++ ++           
Sbjct: 157 RHDSLLGEISVNRERIQQMQQQIAGLNDMIR-TKAGLNKSYSGEIKQLKELLAEGFVDNQ 215

Query: 187 -----------LRRQVSDLRGKIDEAR---NDYLVRAHEEQVKNNAEL-----DAQLQV- 226
                      L+ +V+D +  I + +    +  ++  + + K +A++     D Q QV 
Sbjct: 216 RLLEQERKLDMLKTEVADHQSSITKTKLQIGETELQIVQLKKKFDADVAKELSDVQAQVF 275

Query: 227 -----AAGKEDQLTRATLYSPVRGIVKDIQVTTVGGVLEPGGKLMEIVPLEDQLLIETRI 281
                 A   D+L+R  + +P  G+V D++V T+GGV+     L++IVP +  L++E ++
Sbjct: 276 DLQEKEAALRDRLSRVVIRAPESGMVLDMKVHTIGGVVSAATPLLDIVPAQSDLVVEAKV 335

Query: 282 NPRDIAWIRPGLAATVKVTAYDSSIYGDLHGEVETVSPDTLQDEVKRDQYYYRVYVRTQK 341
            PRDI  +  G  A V+ +A++ +    + G++  +S D+L +E   DQYY  V V+  +
Sbjct: 336 APRDIDRLELGKTADVRFSAFNQATTPVIEGKLTRISADSLVEERSGDQYYL-VRVKVTE 394

Query: 342 AELTNRAGRKFPIVPGMVANVEIKTGQKSVMDYLIKPL-NKVKESLRE 388
             +     RK  + PGM A V I  G ++++ YL+KP  N   ESL E
Sbjct: 395 DGMKKLGNRK--LQPGMPAEVLINAGDRTMLQYLLKPARNMFAESLIE 440