Pairwise Alignments

Query, 389 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Pantoea sp. MT58

Subject, 396 a.a., Type I secretion system, membrane fusion protein LapC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  402 bits (1032), Expect = e-116
 Identities = 209/385 (54%), Positives = 275/385 (71%), Gaps = 2/385 (0%)

Query: 7   DKDLARHERRTSA--IIWLCTAALAIFLIWAHFAILDEVTVGTGKVTPSSRAQVIDSLDG 64
           D D+ R    + A  I+ +C+    I  IWA F  LDEV+ G GKV PSSR QV+ SLDG
Sbjct: 12  DPDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDG 71

Query: 65  GIVKQLNVHEGDIVEKGQVLATLDPTRFQSNFGEAQAKVRTLRASSERLEAELSGTPLKF 124
           GI+ QL V EGD V+  Q++A LDPTR  SN GE+ AK R   ASS RL AE++  PL F
Sbjct: 72  GILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAF 131

Query: 125 SAETLKEPNLVTRERQLYESRRRNLTETISNLQQSLKLVQDELRLTEPLVAKGAAGQVEV 184
            AE    P+L+  E +LY+SRR  L +T + L+ +L  V  EL +T+ L   GAA  VEV
Sbjct: 132 PAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEV 191

Query: 185 IRLRRQVSDLRGKIDEARNDYLVRAHEEQVKNNAELDAQLQVAAGKEDQLTRATLYSPVR 244
           +RL+RQ SDL  KI + R+ Y V+A E   K NAE+D    +  G+ED +TR T+ SPVR
Sbjct: 192 LRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVR 251

Query: 245 GIVKDIQVTTVGGVLEPGGKLMEIVPLEDQLLIETRINPRDIAWIRPGLAATVKVTAYDS 304
           GIVK+IQVTT+GGV+ P G++MEIVP++D+LLIETR++PRDIA+I PG  A VK+TAYD 
Sbjct: 252 GIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDY 311

Query: 305 SIYGDLHGEVETVSPDTLQDEVKRDQYYYRVYVRTQKAELTNRAGRKFPIVPGMVANVEI 364
           +IYG L G VET+SPDT+QD+VK + +YYRV++RT +  L N++GR+F IVPGM+A V+I
Sbjct: 312 AIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDI 371

Query: 365 KTGQKSVMDYLIKPLNKVKESLRER 389
           KTG+K+++DYLIKP N+ KE+LRER
Sbjct: 372 KTGEKTIVDYLIKPFNRAKEALRER 396