Pairwise Alignments

Query, 511 a.a., multidrug efflux MFS transporter permease subunit EmrB from Pantoea sp. MT58

Subject, 509 a.a., Inner membrane component of tripartite multidrug resistance system from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  546 bits (1406), Expect = e-160
 Identities = 260/508 (51%), Positives = 366/508 (72%), Gaps = 1/508 (0%)

Query: 4   KPLEGMPLVLMTVALSLATFMQVLDSTIANVAIPTIAGNLGASNSQGTWVITSFGVANAI 63
           +PL+G  LVL T+ALSLATFM VLD++IANV+IP IAG++G S +QGTWVITSF VANAI
Sbjct: 3   EPLKGAQLVLGTLALSLATFMNVLDTSIANVSIPAIAGDMGVSPAQGTWVITSFAVANAI 62

Query: 64  SIPLTGWLAKRIGEVKLFTWSTILFAIASWACGMSDSLEMLIFFRVIQGIVAGPLIPLSQ 123
           S+PLTGWL +R G+V+LFT S +LF +ASW CG++ ++ +LI FRV+QG+VAGP+IPLSQ
Sbjct: 63  SVPLTGWLTQRFGQVRLFTMSVLLFVVASWLCGLAPNIGLLIAFRVLQGLVAGPMIPLSQ 122

Query: 124 SLLLNNYPPAKRSLALSLWAMTVIVAPICGPILGGWISDNYHWGWIFFINVPIGVAVVIL 183
           +LLL +YP AK   A+++WAMTV+VAP+ GP+LGGWI+DN  W WIF+IN+P+G+    L
Sbjct: 123 TLLLASYPRAKAGTAMAMWAMTVLVAPVAGPLLGGWITDNISWPWIFYINIPVGLVAAAL 182

Query: 184 TLQTLRGRETKTEIRRIDMVGLVLLVVGIGCLQVMLDRGKELDWFNSVEIIVLGVVALIA 243
           T    R R+       +D++GLVLLV+ +G +Q+M+D GKELDWF S EII L VVA+++
Sbjct: 183 TWSIYRSRDPGPRRVPLDVIGLVLLVLFVGAMQIMIDMGKELDWFASGEIIALAVVAVVS 242

Query: 244 LTVLLVWELTDDHPIIDLSLFKSRNFTIGCLSISLAYMLYFGSIVLLPQLLQEVYGYTAT 303
               L WELTD HPI+++ LF  RNF  G L++S+AY L+FG++VLLP  LQ+  GYTAT
Sbjct: 243 FLFFLAWELTDKHPIVEIRLFARRNFVTGTLALSVAYGLFFGNVVLLPLWLQQHMGYTAT 302

Query: 304 WAGLASAPVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAICFYWRAYTFEPGMDFGAS 363
           WAGLA+APVG++ ++LSP +G+   ++D R+L T +FI + +  + R++ F    DF   
Sbjct: 303 WAGLATAPVGLLAIVLSPWVGKNVSRIDPRKLATVAFIGFGLVLWMRSH-FNTQADFMTI 361

Query: 364 AWPQFIQGFAVACFFMPLTTITLSGLPPERMAAASSLSNFMRTFAGSVGTSITTTMWTNR 423
             P  +QG A+A FF+PL  I  SGL P++  +A+ LSNF+R  AG+VGTS+ TT+W +R
Sbjct: 362 LIPTLLQGAAMAFFFIPLQAIVFSGLQPQQTPSAAGLSNFVRITAGAVGTSLFTTLWDSR 421

Query: 424 ESMHHSYMTESITPYNVNSQQMYSQLESLGMTQQQASAYIAQQITNQGLIISANEIFWAS 483
            S+HH+ + ESI   N  +     QL   G++++QA A I + I  Q   ++  ++F+ S
Sbjct: 422 ASLHHAQLVESIHTGNATAMATLDQLMGSGLSREQALANIDRMINQQAYTLAVTDLFYLS 481

Query: 484 AGVFLILLVLIWFARPPFGAGGGGGGAH 511
           A +F +L+ +IWF++P  GA    GGAH
Sbjct: 482 AALFFVLVAVIWFSKPVLGAAVDAGGAH 509