Pairwise Alignments

Query, 330 a.a., RNA polymerase sigma factor RpoS from Pantoea sp. MT58

Subject, 332 a.a., RNA polymerase sigma factor RpoS from Serratia liquefaciens MT49

 Score =  613 bits (1582), Expect = e-180
 Identities = 317/332 (95%), Positives = 325/332 (97%), Gaps = 2/332 (0%)

Query: 1   MSQNTLKVNELHENAEFDENG--AEIFDEKALVENEASDSDVAEEELLSQGATQRVLDAT 58
           MSQNTLKVNELH++A+FDEN   AE FDEKALVE EAS++D+AEEELLSQG TQRVLDAT
Sbjct: 1   MSQNTLKVNELHDDADFDENATEAESFDEKALVEEEASENDLAEEELLSQGVTQRVLDAT 60

Query: 59  QLYLGEIGYSPLLTAEEEVFFARRALRGDIPSRRRMIESNLRLVVKIARRYSNRGLALLD 118
           QLYLGEIGYSPLLTAEEEV+FARRALRGD+PSRRRMIESNLRLVVKIARRYSNRGLALLD
Sbjct: 61  QLYLGEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLD 120

Query: 119 LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY 178
           LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY
Sbjct: 121 LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY 180

Query: 179 LRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDIL 238
           LRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDIL
Sbjct: 181 LRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDIL 240

Query: 239 ADEKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT 298
           ADEKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT
Sbjct: 241 ADEKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT 300

Query: 299 RERVRQIQVEGLRRLREILQAQGLSIEALFRE 330
           RERVRQIQVEGLRRLREILQ QGLSIEALFRE
Sbjct: 301 RERVRQIQVEGLRRLREILQMQGLSIEALFRE 332