Pairwise Alignments

Query, 330 a.a., RNA polymerase sigma factor RpoS from Pantoea sp. MT58

Subject, 330 a.a., RNA polymerase sigma factor RpoS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  607 bits (1565), Expect = e-178
 Identities = 311/330 (94%), Positives = 322/330 (97%)

Query: 1   MSQNTLKVNELHENAEFDENGAEIFDEKALVENEASDSDVAEEELLSQGATQRVLDATQL 60
           +SQNTLKV++L+E+AEFDENG E FDEKAL E E SD+D+AEEELLSQGATQRVLDATQL
Sbjct: 1   LSQNTLKVHDLNEDAEFDENGVEAFDEKALSEEEPSDNDLAEEELLSQGATQRVLDATQL 60

Query: 61  YLGEIGYSPLLTAEEEVFFARRALRGDIPSRRRMIESNLRLVVKIARRYSNRGLALLDLI 120
           YLGEIGYSPLLTAEEEV+FARRALRGD+ SRRRMIESNLRLVVKIARRY NRGLALLDLI
Sbjct: 61  YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI 120

Query: 121 EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR 180
           EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
Sbjct: 121 EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR 180

Query: 181 TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD 240
           TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
Sbjct: 181 TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD 240

Query: 241 EKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE 300
           EK+NGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
Sbjct: 241 EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE 300

Query: 301 RVRQIQVEGLRRLREILQAQGLSIEALFRE 330
           RVRQIQVEGLRRLREILQ QGL+IEALFRE
Sbjct: 301 RVRQIQVEGLRRLREILQTQGLNIEALFRE 330