Pairwise Alignments

Query, 289 a.a., helix-turn-helix domain-containing protein from Pantoea sp. MT58

Subject, 288 a.a., helix-turn-helix domain-containing protein from Serratia liquefaciens MT49

 Score =  135 bits (339), Expect = 1e-36
 Identities = 92/276 (33%), Positives = 150/276 (54%), Gaps = 23/276 (8%)

Query: 7   KKKHINDLVEWIEAHLTDDINIDQITLKSGYSKWHMQRMFKEMTGQTLAAYTRKRRLTMA 66
           ++ HI +L+ WIE +LT+ +++D ++ KSGYSKW++QRMFK+ T  +LA+Y R RRL +A
Sbjct: 4   QESHIRELLVWIEDNLTNPLSLDIVSAKSGYSKWYLQRMFKKQTSLSLASYIRARRLYLA 63

Query: 67  AMALRLTRMTLIDIAVRFGFDNQQNFTRVFKGHFALTPGAFRRIPHLPVKNFHGRILVRS 126
           A ALR T+ +++DI++ + FDNQQ F+R FK HFA +P  +R   H   ++F    LVRS
Sbjct: 64  AFALRYTQKSILDISIEYQFDNQQTFSRCFKKHFAESPSVYR---HARKQDFSH--LVRS 118

Query: 127 LAERA---TLVER----EEELHLRGETQEWECKFGDYFADRDH-QVADQARQ-LVALAGS 177
           L+        V+R    + +  +RG++  +     D   D+ H  +  + ++   AL G 
Sbjct: 119 LSVNQPGDIKVDRIKVAKGQYAIRGKSYPYHLDITD--LDKSHLPIRSKIKETFYALLGE 176

Query: 178 HVAQGWLGFQYGPGQSSADQQNISLFQALEPQYADLLSDHT--SSWSEAAGLYASIRWSG 235
             A       Y   Q   D + + +   L       +SD     +  + +G +    ++G
Sbjct: 177 RPA-----LTYSLAQFVPDGERVRVDYTLGVAADCPVSDGAGLEALPDISGDFCRFCYAG 231

Query: 236 RPEQLTRFIEDIYYQHLPALGVARRPGKDLLRLDFA 271
           +P  L   I  +Y Q LP LG+ARR G DL   +++
Sbjct: 232 KPVALNDHIVQMYTQVLPQLGLARREGPDLTMFNYS 267