Pairwise Alignments

Query, 680 a.a., penicillin-binding protein activator from Pantoea sp. MT58

Subject, 603 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  155 bits (391), Expect = 7e-42
 Identities = 172/684 (25%), Positives = 273/684 (39%), Gaps = 114/684 (16%)

Query: 13  RFLPVILAGLILAACSGQAPQTSTVNIQGPATASSAYYLQQAQQSSDDSKTDW-QLLAIR 71
           R L  +    +LAAC+  +P +S  ++     AS    L+QA  +    K    +L A  
Sbjct: 6   RLLSALCLAALLAACAS-SPSSSLGDLPRTPDASIEQLLEQATTAKTPEKAALLRLSAAD 64

Query: 72  ALLKEGKYPEATQQLSQLPQQ-LSETQQQESLLLKAQLLIAQQKTKDAEPLLAAVKTSAL 130
              K+     ++Q L+Q+    L    Q  +  L A+L +A+ + K A  L A    S  
Sbjct: 65  MAYKQNNPGRSSQILAQVSLDVLKPAAQVFASTLAAELAMARNQPKAA--LTALNHPSLQ 122

Query: 131 SQDQLARYYSLQIASAQGRP------SLSLLRNYIAQEPLLKDADHQSNIDATWQTLTQM 184
           S   L     ++ AS   R       +L+  R  +A  PLL     +SN +A W  +  +
Sbjct: 123 SLKDLPPEQQIRTASVHARAYEADGQTLAAARERVAMAPLLTGDAAKSNHEAIWVLIAAL 182

Query: 185 SPQEASNLVINADEN-VLQGWLDLLAVWRANAQDAEMLKSGIKDWQTRYPQNPAAKTLPT 243
             ++     + A  N  L GW+ L    +  A   E  ++ I  W+ + P +PAA  LPT
Sbjct: 183 PAEQ-----LQASGNPTLDGWITLAQAVKG-AGTLEQQQAAIDTWRAQNPGHPAAVQLPT 236

Query: 244 QLSQMQNYTKASTSIIALLLPLNGQAQVFANAIQKGFNDAKNGVSAPVAQPAAATAQPAA 303
            L++++       + IALLL                          P   P A+  +   
Sbjct: 237 PLTKLKELASQPLTKIALLL--------------------------PQDGPLASVGKALR 270

Query: 304 ADATASAQPAAAAGSSADPISAPQQSATTTPQQQPQSQPQSQPAAAAPASNAQIKVYDTS 363
               A+   A  AG                         Q  P          I+ YD+S
Sbjct: 271 EGFMAAHYQAEQAG-------------------------QKPPV---------IEFYDSS 296

Query: 364 S-QPIEQVMQQAQQDGATIVVGPLLKSNVEKV-ANSQTPLNVLALNEPEKIQNHPNICYF 421
               ++    +AQ  G  +VVGPL K  V+++ A  Q P+  LALN  E  ++   +  F
Sbjct: 297 RLTSLDDFYAKAQAAGVQLVVGPLEKPLVKQLSARPQLPITTLALNYSESDRSPAQLFQF 356

Query: 422 ALSPEDEARDAAHHIWDQGKRQPLLLVPRSGLGDRVTNAFAQEWQTLGGSTVMQQRFGST 481
            L+ EDEAR+ +      G  +   +VPR   G+RV  AF Q+W+  GG  +  +     
Sbjct: 357 GLAAEDEAREVSRRARADGLHRAAAMVPRGEWGERVYKAFRQDWEANGGQVMGVEYVDQP 416

Query: 482 AELKQGI--------NSGAGISLSGTPVNAAPAEPQGVSIAGLTIPAPQQSTPDVVSTSS 533
             L Q I        + G   SL  T      A+P                       S 
Sbjct: 417 VALAQQIADLFQLRKSEGRAKSLQSTVGTDVAAQP-----------------------SR 453

Query: 534 GGGIDAVYIVSTQDELQLIKPMITMRTGSRSNISLYASSRSAQAGAGPDFRLEMDGLQFS 593
              I+ +++  T    Q IKP  T+      ++ +YA+S    A    +  L+M  + F 
Sbjct: 454 RQDIEFIFLAVTPQLAQQIKP--TLNFQYAGDVPVYATSHVFSASGDKNQYLDMTNVMFC 511

Query: 594 DIPLLSGSNPGLMQQTSKSF-NNDYSLVRLYAMGMDAWTLANHFNQMRQSPGFTLDGNTG 652
           + P L  +   L  Q +  +   + SL RLYAMG+DA+ LA    Q++  P   +DG +G
Sbjct: 512 ETPWLLNTTDPLRNQVAAQWPQANGSLGRLYAMGVDAYRLAPRLGQLKALPDTRVDGLSG 571

Query: 653 KLSADTDCVINRKLTWNQYRRGEI 676
            L   T   ++R++ W ++  GEI
Sbjct: 572 SLGISTTQRVDRQMPWAKFVGGEI 595