Pairwise Alignments

Query, 829 a.a., ribonuclease R from Pantoea sp. MT58

Subject, 875 a.a., exoribonuclease R from Pseudomonas simiae WCS417

 Score =  801 bits (2068), Expect = 0.0
 Identities = 431/844 (51%), Positives = 559/844 (66%), Gaps = 40/844 (4%)

Query: 2   SKDPFQDREAEKYENPIPSREFILALLEKREKPASREELAEEMNLQEEEHLEALRRRLRA 61
           S DP   REAEKYENPIPSRE ILA L  R  PASRE+L EE  L  E+ LEALRRRLRA
Sbjct: 6   SLDPEAAREAEKYENPIPSRELILAHLADRGSPASREQLVEEFGLTTEDQLEALRRRLRA 65

Query: 62  MERDGQLVFTRRQCYALPERLDLLRGKVIGHRDGYGFLRAEGQKDDLYLSAEQMKFCMHG 121
           MERD QL++TRR  YA  ++LDL+ G++ GHRDG+GFL  +   DDL++S  QM+    G
Sbjct: 66  MERDAQLIYTRRGTYAPVDKLDLILGRIAGHRDGFGFLIPDDGSDDLFMSPAQMRLVFDG 125

Query: 122 DVILAQPLGADRKGRREARVVRVQEPRNNQIVGRYFTDAGAGFVVPDDSRLSFDILIPPE 181
           D  LA+  G DR+GRRE  +V V    +  IVGRYF + G GFVVPD+ ++  ++LI P 
Sbjct: 126 DRALARVSGLDRRGRREGVIVEVVSRAHESIVGRYFEEGGIGFVVPDNPKVQQEVLITPG 185

Query: 182 ETMNARMGSVVVVELVQRPNRRSKAIGKIAEILGDDMGTSLAVDMALRTHEIPHTWPPEV 241
               A++G  V V++   P  R +  G I E++G+ M   + +D+ALRT++IPH WP  V
Sbjct: 186 RNGAAKVGQFVEVKITHWPTARFQPQGDIVEVVGNYMAPGMEIDVALRTYDIPHVWPEAV 245

Query: 242 EAQISKLKEEVPEEAKKGRVDLRKLPLVTIDGEDARDFDDAVYCEKKRG------GGWRL 295
             +  KLK EV E+ K+ R+DLR LP VTIDGEDARDFDDAVYCE K G      GGW+L
Sbjct: 246 LKEAGKLKPEVEEKDKEKRIDLRHLPFVTIDGEDARDFDDAVYCEAKPGKLRLFSGGWKL 305

Query: 296 WVAIADVSYYVRPGTPLDDEAHQRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVC 355
           +VAIADVS YV+ G+ LD+EA  RG SVYFP +V+PMLPE LSNGLCSLNP+VDRL MVC
Sbjct: 306 FVAIADVSSYVKIGSALDNEAQVRGNSVYFPERVIPMLPEQLSNGLCSLNPKVDRLAMVC 365

Query: 356 EMTISTKGKLTGFKHYEAVMNSHARLTYNKVWNILQGD-----KELRQQYAPLVKDLEEL 410
           EMTIS  G++T ++ YEAV++S ARLTYNKV  IL+       K LR +YA +V  L++L
Sbjct: 366 EMTISKTGEMTDYQFYEAVIHSQARLTYNKVSTILETPKTSEAKALRSEYAGVVPHLKQL 425

Query: 411 NNLYHALEAAREERGGISFETEEAKFIFNAERRIERVERASRNDAHKLIEECMILANIAS 470
            +LY  L  AR  RG I FET+E + +F +ER+I  +   +RNDAHKLIEECM+ AN+A+
Sbjct: 426 YSLYKVLLGARHTRGAIDFETQETRIVFGSERKIAAITPTTRNDAHKLIEECMLAANVAT 485

Query: 471 ARFVEKNQEPALFRDHDRPTDESIKSFRTVLNELGLTL-PGGNKPQPVDYAALLKQVADR 529
           A F++K++ PAL+R HD P  E ++  R  L ELGL+L  G + P P DY ALL  + DR
Sbjct: 486 AEFLKKHEIPALYRVHDGPPPERLEKLRAFLGELGLSLHKGKDGPTPKDYQALLASIKDR 545

Query: 530 PDAEMLQTMLLRSMKQAVYDPENRGHFGLALSSYAHFTSPIRRYPDLTLHRAIKYLLAKE 589
           PD  ++QT++LRS+ QAVY  +N+GHFGL   +Y HFTSPIRRYPDL  HRAI+ ++  +
Sbjct: 546 PDYHVIQTVMLRSLSQAVYSADNQGHFGLNYEAYTHFTSPIRRYPDLLTHRAIRSVIHSK 605

Query: 590 QGEGKGLVQRAIKYLMPKDKNAKDLTTATGGYHYDMPEMLQLGLHCSLTERRADEATRDV 649
           Q      V+RA    +PK +           Y YD   + QLG  CS++ERRADEATRDV
Sbjct: 606 QNTPH--VKRAGAMTIPKARI----------YPYDEAALEQLGEQCSMSERRADEATRDV 653

Query: 650 ADWLKCDFMQDQVGNVFNGVISSVTGFGFFVRLSDLFIDGLVHVSTLDNDYYRFDPVGQR 709
            +WLKC+FM+D+VG  F GVI++VTGFG FV L+D++++GLVHV+ L  DYY FDPV  R
Sbjct: 654 VNWLKCEFMKDRVGETFPGVITAVTGFGLFVELTDIYVEGLVHVTALPGDYYHFDPVHHR 713

Query: 710 LIGESGGRTYRLGDTVEVRVEAVHMDERKIDFALIS------SQRQVRG-----EGKTAR 758
           L GE  GR++RLGDTVEV+V  V +DERKIDF +          R+ RG     +GK A 
Sbjct: 714 LAGERTGRSFRLGDTVEVQVMRVDLDERKIDFGMSDKPAESPGSRKKRGSEPASKGKAAP 773

Query: 759 DRAKRDDNAPTKRRRNASRKSNFEPDSAFRGDKGKPAAADSANKSKNVSEKTRKIAAATR 818
            +A   + AP K  R +S K     + A    +   AAA +A   K+   K + +  A  
Sbjct: 774 AKATAAEPAPAKAGRRSSTK-----EKAPEAYRPSDAAAKNAELRKSRELKQQLLNEAKS 828

Query: 819 AKRA 822
             +A
Sbjct: 829 GGKA 832