Pairwise Alignments

Query, 802 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Pantoea sp. MT58

Subject, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

 Score = 1130 bits (2922), Expect = 0.0
 Identities = 549/803 (68%), Positives = 669/803 (83%), Gaps = 4/803 (0%)

Query: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCSDIVV 61
           + +YDSSSIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDN+IDEALAGHC DI V
Sbjct: 4   NQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDITV 63

Query: 62  TIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121
            IH D S+SV+D+GRGIP  +H+EEG+SAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS
Sbjct: 64  IIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 123

Query: 122 VVNALSQKLELTIRREGKVHQQVYVHGVPQSPLAVTGETDITGTRVRFWPSHETFTNVRD 181
           VVNALS+KL LT+RR GK+ +Q YVHGVPQ+P+AV G+++ TGT + F PS ETF N+  
Sbjct: 124 VVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKNIH- 182

Query: 182 FEYDILAKRLRELSFLNSGVSIRLEDKRDGKNDHFHYEGGIRAFVEYLNKNKTPIHPTVF 241
           F +DILAKR+RELSFLNSGV I L+D+R GK + F YEGG+RAFVEYLN NKTP++  VF
Sbjct: 183 FSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQVF 242

Query: 242 YFSTEKD-GIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE 300
           +F+ ++D G+GVEVALQWND F EN+ CFTNNIPQRDGGTHL GFR+++TR+LN+Y+++E
Sbjct: 243 HFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIEQE 302

Query: 301 GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY 360
           G +KK KV+ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+MN+  A++
Sbjct: 303 GLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFADF 362

Query: 361 LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEI 420
           LLENP++AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE+
Sbjct: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422

Query: 421 YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR 480
           YLVEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKM++SQEV TLITALGCGIGR
Sbjct: 423 YLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGR 482

Query: 481 DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG 540
           +EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQ+PE++ERG++YIAQPPLYKVK+G
Sbjct: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVKRG 542

Query: 541 KQEQYIKDDEAMDQYQIAIALDGATLHTNASAPALGGEPLETLVSDFNSTQKMIKRMERR 600
           KQEQYIKDDEAM++Y    AL+ A+LH + SAPA+ G  LE LV++F S  K +KR+ R 
Sbjct: 543 KQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRLSRL 602

Query: 601 YPMAMLRAMIY--HDTLSDLSNEAEVTTWLNGLVSYLTEREAHGSTYLAQVRENRETNLF 658
           YP  +    +Y    TL  L + A +  WL    + L   +  G  Y A +RE++E N++
Sbjct: 603 YPEELTEHFVYLPEVTLEQLGDHAVMQAWLAQFQARLNSSQKSGLAYNASLREDKERNVW 662

Query: 659 EPVLRVRTHGVDTDYPLEADFIQGPEYRKICALGSQLRGLLEEDAYIERGERRQPVASFE 718
            P + + +HG+ +      DF    +YR +  +G++L  LL E AY++RGERR+ +  F+
Sbjct: 663 LPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIVEFK 722

Query: 719 QAIEWLVKESRRGLSVQRYKGLGEMNPDQLWETTMDPDSRRMLRVTIKDAIGADQLFTTL 778
           + ++WL+ E+ +  ++QRYKGLGEMNPDQLWETTMDP  RRML+VTI+DAI ADQ+F TL
Sbjct: 723 EGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIFNTL 782

Query: 779 MGDAVEPRRAFIEENALKAANID 801
           MGDAVEPRR FIE NAL  +N+D
Sbjct: 783 MGDAVEPRRDFIESNALSVSNLD 805