Pairwise Alignments

Query, 545 a.a., membrane protein insertase YidC from Serratia liquefaciens MT49

Subject, 542 a.a., 60 kDa inner membrane insertion protein (RefSeq) from Shewanella loihica PV-4

 Score =  563 bits (1452), Expect = e-165
 Identities = 282/549 (51%), Positives = 379/549 (69%), Gaps = 20/549 (3%)

Query: 1   MDSQRNLLLIALLFVSFMIWQAWQTDNAPQPVAQTTQQTSNTATGDAASSAVP------- 53
           M+SQRN+LLI LLFVSF++WQ WQTD  PQPVA  +   ++T T DA S+ VP       
Sbjct: 1   MESQRNILLIGLLFVSFLLWQQWQTDKNPQPVATESSVVASTVT-DAHSADVPDADAALP 59

Query: 54  --ASGQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLLETTPSFVYQAQ 111
              +   +LI+V TD L+L IN  GGDI  + L+ +        PF LL+ T    Y +Q
Sbjct: 60  EAVAASKELISVTTDQLTLKINPVGGDIVYSALVGHKLEQDKEEPFVLLQQTKDIYYISQ 119

Query: 112 SGLTGRNGPDNPANGERPLFQAAQDSYTLPEGQEELRIPLTFTGKDGAIYTKTFVLKRNH 171
           SGL GRNG D+   G R  F +   +YTL +GQ+ L IPLT+   +G  YTK F L R  
Sbjct: 120 SGLIGRNGIDSSTKG-RAHFSSQSQAYTLADGQDTLEIPLTYVADNGVTYTKVFTLHRGK 178

Query: 172 YAVAVDYNVDNKGTTPLELTLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSSEDKYQ 231
           + V V+Y ++N     L++ ++GQ+K + +         ++  + T+RGAA+S+++ +Y+
Sbjct: 179 FDVGVEYRINNTSAEQLQVQMYGQIKHSIK------KSESSMMMPTYRGAAFSTADTRYE 232

Query: 232 KYAFDK--DENLSVTTQGGWVAMLQQYFATAWVPATQGSNTFYTAKPGDNLSTIGFKSTP 289
           KY+F+   D+NL   T GGW AMLQ YF +AWVP     NT +++     L+ IGF+   
Sbjct: 233 KYSFEDMADKNLDKKTLGGWAAMLQHYFVSAWVPPANDQNTIFSSVSAGGLANIGFRGAV 292

Query: 290 VVVQPGAQQQLNATLWVGPELQDQMAQLAPHLDLTVDYGWLWFISQPLFKLLKFIHGFIG 349
             V PG QQ ++A  +VGP+ Q+ ++ ++  L+L VDYG+LW+++ P+  LL F   F+G
Sbjct: 293 YDVAPGTQQTISAQFYVGPKDQEALSAISESLNLVVDYGFLWWLAIPIHWLLMFYQSFVG 352

Query: 350 NWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDKQRMSQEMMALY 409
           NWG +II+IT  VRG++YPLTKAQYTSMAKMR LQPKLQ M+ER GDD+Q+M Q MM LY
Sbjct: 353 NWGVAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLQDMKERFGDDRQKMGQAMMELY 412

Query: 410 KSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQDPYYILPILMG 469
           K EKVNP+GGCLP+++QMPIF+ALY++L+ S ELRHAPF LWI DLS QDPYY+LP+LMG
Sbjct: 413 KKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQDPYYVLPLLMG 472

Query: 470 VTMFFIQKMSPTTVT-DPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLI 528
           V+MF +QKM P   T DPMQQK+M +MPVIFTVFFLWFP+GLVLY++V NLV I QQ++I
Sbjct: 473 VSMFLMQKMQPMAPTMDPMQQKMMQWMPVIFTVFFLWFPAGLVLYWLVGNLVAITQQKII 532

Query: 529 YRGLEKRGL 537
           Y GLEK+GL
Sbjct: 533 YAGLEKKGL 541