Pairwise Alignments

Query, 545 a.a., membrane protein insertase YidC from Serratia liquefaciens MT49

Subject, 539 a.a., 60 kDa inner membrane insertion protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  263 bits (671), Expect = 2e-74
 Identities = 178/560 (31%), Positives = 280/560 (50%), Gaps = 53/560 (9%)

Query: 1   MDSQRNLLLIALLFVSFMIWQ------AWQTDNAPQPVAQTTQQTSNTATGDAAS-SAVP 53
           M+S+R ++ IAL FV  + W        W    APQ   + T  +++ A   +AS +A P
Sbjct: 1   MESKRAIIAIALSFVVLVGWSYLADHMGWNGQPAPQAQQEETAPSASQAAPQSASQAAAP 60

Query: 54  AS---------GQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLLETTP 104
           A            G+ +TV T +    +++ GG ++   L  Y   + +  P   +  T 
Sbjct: 61  APRAETPVFLPSAGREVTVVTPLYKAVLHSGGGVLKHFSLTRYRTAITAGAPAVDMVDTA 120

Query: 105 SFVYQAQSGLTGRNGPDNPANGERPLFQAAQDSY-----TLPEGQEELRIPLTFTGK-DG 158
           S V      L          NG+ P +   Q S+     +L  GQ  +   LTFTG+ DG
Sbjct: 121 STVMSPLGLLI---------NGQ-PSWNTGQWSFDGGDLSLGAGQSGV---LTFTGEVDG 167

Query: 159 AIYTKTFVLKRNHYAVAVDYNVDNKGTTPLELTLFGQLKQTTELPKHRDTGSNNFALHTF 218
               +      + Y ++    +      PL      +L  T         G      HT 
Sbjct: 168 VRVVRELTFSADTYLISEKVRL-----APLADARTVRLGFTVGTGNLSPNGGQYD--HT- 219

Query: 219 RGAAYSSSEDKYQKYAFDKDENLSVTTQGGWVAMLQQYFATAWVPATQGSNTFYTAKPGD 278
           R A         +  A D ++ +  T    W A++  YF  A  P      T    K  +
Sbjct: 220 RVAWLHDGSFSEKTSASDLEKGVLETGALSWGAVMSNYFLVAAAPVDTTGVTL-KGKLQE 278

Query: 279 NLSTIGFKSTPVVVQPGAQQQLNATLWVGPELQDQMAQLAPHLDLTVDYGWLWFISQPLF 338
            +  +  +   V +  G +  +    W GP+ +  + +    L   ++ GW   I++PL 
Sbjct: 279 GVYRVAMERGDVSIPAGGETTVACNYWFGPKDRGLLKEAPNQLAEAINLGWFSIIARPLV 338

Query: 339 KLLKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK 398
            +L+F H ++GN+G +II++T +++ + +PL+   Y SM +M+ LQP LQ +RE+ GDD+
Sbjct: 339 DMLEFFHKYVGNYGVAIILLTVVIKLVFWPLSHKSYKSMEQMKKLQPMLQKLREKHGDDR 398

Query: 399 QRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPF--------AL 450
           ++M++EMM LYK+ KVNP GGCLP+++Q+P+F  LY  L+ ++ELRHA F         +
Sbjct: 399 EKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHASFITHLPFTDMV 458

Query: 451 WIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGL 510
           W+ DLSA+DPYYI PI+MG TM   QK++P    DP Q KIM FMPV+FT  FL FPSGL
Sbjct: 459 WLADLSAKDPYYITPIVMGATMLLQQKLTPAP-GDPTQAKIMMFMPVVFTFMFLSFPSGL 517

Query: 511 VLYYIVSNLVTILQQQLIYR 530
           V+Y++ +N+++I QQ  + R
Sbjct: 518 VVYWLCNNVLSIAQQWWMLR 537